(Q44276419)

1 December 2017

title

MirPlex: a tool for identifying miRNAs in high-throughput sRNA datasets without a genome (English)

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1 December 2017

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2

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1 December 2017

Tamas Dalmay

3

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author name string

Daniel Mapleson

series ordinal

1

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1 December 2017

Vincent Moulton

series ordinal

4

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1 December 2017

publication date

26 November 2012

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Journal of Experimental Zoology. Part B: Molecular and Developmental Evolution

1 December 2017

published in

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1 December 2017

volume

320

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1 December 2017

issue

1

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1 December 2017

page(s)

47-56

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A two-hit trigger for siRNA biogenesis in plants

1 December 2017

cites work

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https://api.crossref.org/works/10.1002%2FJEZ.B.22483

Vive la différence: biogenesis and evolution of microRNAs in plants and animals

21 January 2018

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MicroRNAs: genomics, biogenesis, mechanism, and function

21 January 2018

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MicroRNAs: target recognition and regulatory functions

21 January 2018

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https://api.crossref.org/works/10.1002%2FJEZ.B.22483

Evidence that microRNA precursors, unlike other non-coding RNAs, have lower folding free energies than random sequences

21 January 2018

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https://api.crossref.org/works/10.1002%2FJEZ.B.22483

pre-miRNA profiles obtained through application of locked nucleic acids and deep sequencing reveals complex 5'/3' arm variation including concomitant cleavage and polyuridylation patterns

21 January 2018

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https://api.crossref.org/works/10.1002%2FJEZ.B.22483

Origins and Mechanisms of miRNAs and siRNAs

21 January 2018

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https://api.crossref.org/works/10.1002%2FJEZ.B.22483

A novel miRNA processing pathway independent of Dicer requires Argonaute2 catalytic activity

21 January 2018

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https://api.crossref.org/works/10.1002%2FJEZ.B.22483

Evolution and functional diversification of MIRNA genes

21 January 2018

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https://api.crossref.org/works/10.1002%2FJEZ.B.22483

MUSCLE: multiple sequence alignment with high accuracy and high throughput

21 January 2018

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https://api.crossref.org/works/10.1002%2FJEZ.B.22483

Discovering microRNAs from deep sequencing data using miRDeep

21 January 2018

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https://api.crossref.org/works/10.1002%2FJEZ.B.22483

miRBase: microRNA Sequences and Annotation

21 January 2018

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https://api.crossref.org/works/10.1002%2FJEZ.B.22483

Fast folding and comparison of RNA secondary structures

21 January 2018

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https://api.crossref.org/works/10.1002%2FJEZ.B.22483

MicroRNA biogenesis: coordinated cropping and dicing

21 January 2018

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Structural aspects of microRNA biogenesis

21 January 2018

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Arabidopsis micro-RNA biogenesis through Dicer-like 1 protein functions.

21 January 2018

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Plant and animal microRNAs: similarities and differences.

21 January 2018

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A toolkit for analysing large-scale plant small RNA datasets

21 January 2018

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Comparing de novo genome assembly: the long and short of it

21 January 2018

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https://api.crossref.org/works/10.1002%2FJEZ.B.22483

CARPEL FACTORY, a Dicer homolog, and HEN1, a novel protein, act in microRNA metabolism in Arabidopsis thaliana

21 January 2018

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https://api.crossref.org/works/10.1002%2FJEZ.B.22483

A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana

21 January 2018

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https://api.crossref.org/works/10.1002%2FJEZ.B.22483

miRNAkey: a software for microRNA deep sequencing analysis

21 January 2018

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https://api.crossref.org/works/10.1002%2FJEZ.B.22483

Functional polarity is introduced by Dicer processing of short substrate RNAs

21 January 2018

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https://api.crossref.org/works/10.1002%2FJEZ.B.22483

Deciphering the diversity of small RNAs in plants: the long and short of it.

21 January 2018

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Molecular paleobiological insights into the origin of the Brachiopoda

21 January 2018

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Systematic comparison of three genomic enrichment methods for massively parallel DNA sequencing

21 January 2018

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FlyBase: enhancing Drosophila Gene Ontology annotations

21 January 2018

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A new learning paradigm: learning using privileged information

21 January 2018

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https://api.crossref.org/works/10.1002%2FJEZ.B.22483

An overview of statistical learning theory.

21 January 2018

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https://api.crossref.org/works/10.1002%2FJEZ.B.22483

The deep evolution of metazoan microRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FJEZ.B.22483

In silico miRNA prediction in metazoan genomes: balancing between sensitivity and specificity

21 January 2018

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https://api.crossref.org/works/10.1002%2FJEZ.B.22483

MiRPara: a SVM-based software tool for prediction of most probable microRNA coding regions in genome scale sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FJEZ.B.22483

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FJEZ.B.22483

A practical comparison of de novo genome assembly software tools for next-generation sequencing technologies

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FJEZ.B.22483

21 January 2018

Identifiers

DOI

10.1002/JEZ.B.22483

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release_gcvt3gld2fcjrpn4x5ei5hcg7a

1 December 2017

Fatcat ID

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Fatcat

https://api.fatcat.wiki/v0/release/gcvt3gld2fcjrpn4x5ei5hcg7a

mapped directly with Wikidata item

24 November 2022

based on heuristic

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