(Q44741400)

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Aromatic residues located close to the active center are essential for the catalytic reaction of flap endonuclease-1 from hyperthermophilic archaeon Pyrococcus horikoshii

scientific article published on 23 January 2004

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Europe PubMed Central

PubMed publication ID

5 December 2017

Aromatic residues located close to the active center are essential for the catalytic reaction of flap endonuclease-1 from hyperthermophilic archaeon Pyrococcus horikoshii (English)

1 reference

Europe PubMed Central

PubMed publication ID

5 December 2017

Pyrococcus horikoshii

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Pyrococcus horikoshii

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author name string

Eriko Matsui

1

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Europe PubMed Central

PubMed publication ID

5 December 2017

Junko Abe

2

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Europe PubMed Central

PubMed publication ID

5 December 2017

Hideshi Yokoyama

3

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Europe PubMed Central

PubMed publication ID

5 December 2017

Ikuo Matsui

4

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Europe PubMed Central

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5 December 2017

language of work or name

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publication date

23 January 2004

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Europe PubMed Central

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5 December 2017

Journal of Biological Chemistry

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Europe PubMed Central

PubMed publication ID

5 December 2017

279

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Europe PubMed Central

PubMed publication ID

5 December 2017

16

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Europe PubMed Central

PubMed publication ID

5 December 2017

16687-16696

1 reference

Europe PubMed Central

PubMed publication ID

5 December 2017

Thermostable flap endonuclease from the archaeon, Pyrococcus horikoshii, cleaves the replication fork-like structure endo/exonucleolytically

1 reference

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21 January 2018

Newly discovered archaebacterial flap endonucleases show a structure-specific mechanism for DNA substrate binding and catalysis resembling human flap endonuclease-1.

1 reference

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21 January 2018

The FEN-1 family of structure-specific nucleases in eukaryotic DNA replication, recombination and repair

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313695200

21 January 2018

Flap endonuclease homologs in archaebacteria exist as independent proteins.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313695200

21 January 2018

Enzymes and reactions at the eukaryotic DNA replication fork

1 reference

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21 January 2018

RPA governs endonuclease switching during processing of Okazaki fragments in eukaryotes

1 reference

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21 January 2018

Second pathway for completion of human DNA base excision-repair: reconstitution with purified proteins and requirement for DNase IV (FEN1).

1 reference

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21 January 2018

A role for FEN-1 in nonhomologous DNA end joining: the order of strand annealing and nucleolytic processing events

1 reference

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21 January 2018

Functional domains within FEN-1 and RAD2 define a family of structure-specific endonucleases: implications for nucleotide excision repair

1 reference

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21 January 2018

The flexible loop of human FEN1 endonuclease is required for flap cleavage during DNA replication and repair.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313695200

21 January 2018

Arginine residues 47 and 70 of human flap endonuclease-1 are involved in DNA substrate interactions and cleavage site determination

1 reference

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21 January 2018

Cleavage specificity of Saccharomyces cerevisiae flap endonuclease 1 suggests a double-flap structure as the cellular substrate

1 reference

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21 January 2018

Structure of the DNA repair and replication endonuclease and exonuclease FEN-1: coupling DNA and PCNA binding to FEN-1 activity

1 reference

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21 January 2018

The crystal structure of flap endonuclease-1 from Methanococcus jannaschii

1 reference

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21 January 2018

Molecular structure and novel DNA binding sites located in loops of flap endonuclease-1 from Pyrococcus horikoshii

1 reference

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21 January 2018

A helical arch allowing single-stranded DNA to thread through T5 5'-exonuclease

1 reference

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21 January 2018

Crystal structure of Thermus aquaticus DNA polymerase

1 reference

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21 January 2018

Structure of bacteriophage T4 RNase H, a 5' to 3' RNA-DNA and DNA-DNA exonuclease with sequence similarity to the RAD2 family of eukaryotic proteins

1 reference

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21 January 2018

Calf 5' to 3' exo/endonuclease must slide from a 5' end of the substrate to perform structure-specific cleavage

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313695200

21 January 2018

Interactions of mutant and wild-type flap endonucleases with oligonucleotide substrates suggest an alternative model of DNA binding

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313695200

21 January 2018

Essential amino acids for substrate binding and catalysis of human flap endonuclease 1

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313695200

21 January 2018

Modeling of Flap Endonuclease Interactions with DNA Substrate

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313695200

21 January 2018

Partial functional deficiency of E160D flap endonuclease-1 mutant in vitro and in vivo is due to defective cleavage of DNA substrates

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313695200

21 January 2018

Mutagenesis of conserved lysine residues in bacteriophage T5 5'-3' exonuclease suggests separate mechanisms of endo-and exonucleolytic cleavage

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313695200

21 January 2018

Determination of the best-fit values of kinetic parameters of the Michaelis-Menten equation by the method of least squares with the Taylor expansion

1 reference

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21 January 2018

Subsite mapping of enzymes. Studies on Bacillus subtilis amylase

1 reference

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21 January 2018

Subsite structure of Saccharomycopsis alpha-amylase secreted from Saccharomyces cerevisiae.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313695200

21 January 2018

Improved activity and modulated action pattern obtained by random mutagenesis at the fourth beta-alpha loop involved in substrate binding to the catalytic (beta/alpha)8-barrel domain of barley alpha-amylase 1.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313695200

21 January 2018

Structure of the DNA binding domain of E. coli SSB bound to ssDNA

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313695200

21 January 2018

Structure of the single-stranded-DNA-binding domain of replication protein A bound to DNA

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313695200

21 January 2018

Defining the roles of individual residues in the single-stranded DNA binding site of PcrA helicase

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313695200

21 January 2018

The crystal structure of DNA mismatch repair protein MutS binding to a G x T mismatch

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313695200

21 January 2018

Crystal structures of mismatch repair protein MutS and its complex with a substrate DNA

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313695200

21 January 2018

Evidence that phenylalanine 69 in Escherichia coli RuvC resolvase forms a stacking interaction during binding and destabilization of a Holliday junction DNA substrate.

1 reference

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21 January 2018

Raster3D Version 2.0. A program for photorealistic molecular graphics

1 reference

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21 January 2018

Crystal structures of human DNA polymerase beta complexed with gapped and nicked DNA: evidence for an induced fit mechanism

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313695200

21 January 2018

A comparison of eubacterial and archaeal structure-specific 5'-exonucleases

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313695200

21 January 2018

In eukaryotic flap endonuclease 1, the C terminus is essential for substrate binding

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313695200

21 January 2018

Interpretation of dependency of rate parameters on the degree of polymerization of substrate in enzyme-catalyzed reactions. Evaluation of subsite affinities of exo-enzyme

1 reference

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21 January 2018

Alteration of bond-cleavage pattern in the hydrolysis catalyzed by Saccharomycopsis alpha-amylase altered by site-directed mutagenesis

1 reference

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21 January 2018

Identifiers

10.1074/JBC.M313695200

1 reference

Europe PubMed Central

PubMed publication ID

5 December 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

5 December 2017

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