(Q45928147)

17 December 2017

title

SMG1 is an ancient nonsense-mediated mRNA decay effector. (English)

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17 December 2017

A biological rationale for NMD in plants

sponsor

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Gateway to Research Project ID

Gateway to Research

27 April 2019

1

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17 December 2017

author name string

Brendan Davies

series ordinal

2

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17 December 2017

publication date

5 November 2013

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17 December 2017

published in

The Plant Journal

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17 December 2017

volume

76

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17 December 2017

issue

5

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17 December 2017

page(s)

800-810

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17 December 2017

Basic local alignment search tool

cites work

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UPF1 is required for nonsense-mediated mRNA decay (NMD) and RNAi in Arabidopsis

21 January 2018

1 reference

The human RNA surveillance factor UPF1 is required for S phase progression and genome stability

21 January 2018

1 reference

Kill the messenger: mRNA decay and plant development

21 January 2018

1 reference

Functional analysis of the grapevine paralogs of the SMG7 NMD factor using a heterolog VIGS-based gene depletion-complementation system.

21 January 2018

1 reference

Archean Molecular Fossils and the Early Rise of Eukaryotes

21 January 2018

1 reference

The mRNA surveillance protein hSMG-1 functions in genotoxic stress response pathways in mammalian cells

21 January 2018

1 reference

Identification of a microRNA that activates gene expression by repressing nonsense-mediated RNA decay

21 January 2018

1 reference

An alternative branch of the nonsense-mediated decay pathway

21 January 2018

1 reference

Small RNAs and their roles in plant development.

21 January 2018

1 reference

Smg1 nonsense mutations do not abolish nonsense-mediated mRNA decay in Drosophila melanogaster

21 January 2018

1 reference

Human proline-rich nuclear receptor coregulatory protein 2 mediates an interaction between mRNA surveillance machinery and decapping complex

21 January 2018

1 reference

SMG5-PNRC2 is functionally dominant compared with SMG5-SMG7 in mammalian nonsense-mediated mRNA decay

21 January 2018

1 reference

Is there a classical nonsense-mediated decay pathway in trypanosomes?

21 January 2018

1 reference

The Arabidopsis TOR kinase links plant growth, yield, stress resistance and mRNA translation

21 January 2018

1 reference

Rooting the eukaryotic tree with mitochondrial and bacterial proteins

21 January 2018

1 reference

SMG6 promotes endonucleolytic cleavage of nonsense mRNA in human cells

21 January 2018

1 reference

SMG7 is a 14-3-3-like adaptor in the nonsense-mediated mRNA decay pathway

21 January 2018

1 reference

Ribosome occupancy of the yeast CPA1 upstream open reading frame termination codon modulates nonsense-mediated mRNA decay

21 January 2018

1 reference

Nonsense-mediated mRNA decay in Drosophila: at the intersection of the yeast and mammalian pathways

21 January 2018

1 reference

Exon-junction complex components specify distinct routes of nonsense-mediated mRNA decay with differential cofactor requirements

21 January 2018

1 reference

Structures of the PIN domains of SMG6 and SMG5 reveal a nuclease within the mRNA surveillance complex

21 January 2018

1 reference

SMG-1 is a phosphatidylinositol kinase-related protein kinase required for nonsense-mediated mRNA Decay in Caenorhabditis elegans

21 January 2018

1 reference

Impact of nonsense-mediated mRNA decay on the global expression profile of budding yeast

21 January 2018

1 reference

Identification of novel conserved peptide uORF homology groups in Arabidopsis and rice reveals ancient eukaryotic origin of select groups and preferential association with transcription factor-encoding genes

21 January 2018

1 reference

Genome-wide analysis of mRNAs regulated by the nonsense-mediated and 5' to 3' mRNA decay pathways in yeast

21 January 2018

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The Arabidopsis lyrata genome sequence and the basis of rapid genome size change

21 January 2018

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RNA homeostasis governed by cell type-specific and branched feedback loops acting on NMD.

21 January 2018

1 reference

Gene silencing by microRNAs: contributions of translational repression and mRNA decay

21 January 2018

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SMG6 is the catalytic endonuclease that cleaves mRNAs containing nonsense codons in metazoan

21 January 2018

1 reference

AAA+ proteins RUVBL1 and RUVBL2 coordinate PIKK activity and function in nonsense-mediated mRNA decay

21 January 2018

1 reference

Nonsense-mediated mRNA decay factors, UPF1 and UPF3, contribute to plant defense.

21 January 2018

1 reference

An unusual arrangement of two 14-3-3-like domains in the SMG5-SMG7 heterodimer is required for efficient nonsense-mediated mRNA decay

21 January 2018

1 reference

Conserved Peptide Upstream Open Reading Frames are Associated with Regulatory Genes in Angiosperms

21 January 2018

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Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis.

21 January 2018

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Parameters determining the efficiency of gene targeting in the moss Physcomitrella patens

21 January 2018

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MRE11 and RAD50, but not NBS1, are essential for gene targeting in the moss Physcomitrella patens

21 January 2018

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mRNA sequence features that contribute to translational regulation in Arabidopsis

21 January 2018

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Inter-kingdom conservation of mechanism of nonsense-mediated mRNA decay

21 January 2018

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Transcriptional control of gene expression by microRNAs

21 January 2018

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Structural basis of the PNRC2-mediated link between mrna surveillance and decapping

21 January 2018

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Clustal W and Clustal X version 2.0

21 January 2018

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Emerging common themes in regulation of PIKKs and PI3Ks

21 January 2018

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SMART 7: recent updates to the protein domain annotation resource

21 January 2018

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Evidence for the widespread coupling of alternative splicing and nonsense-mediated mRNA decay in humans

21 January 2018

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Saccharomyces cerevisiae Ebs1p is a putative ortholog of human Smg7 and promotes nonsense-mediated mRNA decay

21 January 2018

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From Gateway to MultiSite Gateway in one recombination event.

21 January 2018

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Smg1 is required for embryogenesis and regulates diverse genes via alternative splicing coupled to nonsense-mediated mRNA decay

21 January 2018

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Nonsense surveillance regulates expression of diverse classes of mammalian transcripts and mutes genomic noise

21 January 2018

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The late steps of plant nonsense-mediated mRNA decay.

21 January 2018

1 reference

Functions of the nonsense-mediated mRNA decay pathway in Drosophila development

21 January 2018

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Recognition and elimination of nonsense mRNA.

21 January 2018

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Tagged mutagenesis and gene-trap in the moss, Physcomitrella patens by shuttle mutagenesis

21 January 2018

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Plant nonsense-mediated mRNA decay is controlled by different autoregulatory circuits and can be induced by an EJC-like complex.

21 January 2018

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Plant upstream ORFs can trigger nonsense-mediated mRNA decay in a size-dependent manner.

21 January 2018

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N- and C-terminal Upf1 phosphorylations create binding platforms for SMG-6 and SMG-5:SMG-7 during NMD

21 January 2018

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Extensive coupling of alternative splicing of pre-mRNAs of serine/arginine (SR) genes with nonsense-mediated decay

21 January 2018

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High resolution transcriptome maps for wild-type and nonsense-mediated decay-defective Caenorhabditis elegans

21 January 2018

1 reference

A role for nonsense-mediated mRNA decay in plants: pathogen responses are induced in Arabidopsis thaliana NMD mutants

21 January 2018

1 reference

The salicylic acid dependent and independent effects of NMD in plants

21 January 2018

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Nonsense-mediated mRNA decay factors act in concert to regulate common mRNA targets

21 January 2018

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The Physcomitrella Genome Reveals Evolutionary Insights into the Conquest of Land by Plants

21 January 2018

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Myosin domain evolution and the primary divergence of eukaryotes

21 January 2018

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Arabidopsis SMG7 protein is required for exit from meiosis.

21 January 2018

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Aberrant growth and lethality of Arabidopsis deficient in nonsense-mediated RNA decay factors is caused by autoimmune-like response

21 January 2018

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Comparative analysis of the SBP-box gene families in P. patens and seed plants

21 January 2018

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Regulation of multiple core spliceosomal proteins by alternative splicing-coupled nonsense-mediated mRNA decay

21 January 2018

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The upstream open reading frame of the Arabidopsis AtMHX gene has a strong impact on transcript accumulation through the nonsense-mediated mRNA decay pathway

21 January 2018

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Polypyrimidine tract-binding protein homologues from Arabidopsis underlie regulatory circuits based on alternative splicing and downstream control.

21 January 2018

1 reference

BAIUCAS: a novel BLAST-based algorithm for the identification of upstream open reading frames with conserved amino acid sequences and its application to the Arabidopsis thaliana genome.

21 January 2018

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Conserved upstream open reading frames in higher plants

21 January 2018

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SMG7 acts as a molecular link between mRNA surveillance and mRNA decay

21 January 2018

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Role for Upf2p phosphorylation in Saccharomyces cerevisiae nonsense-mediated mRNA decay

21 January 2018

1 reference

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

21 January 2018

1 reference

Repairing breaks in the plant genome: the importance of keeping it together

21 January 2018

1 reference

Nonsense-mediated mRNA decay effectors are essential for zebrafish embryonic development and survival

21 January 2018

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Autoregulation of the nonsense-mediated mRNA decay pathway in human cells

21 January 2018

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21 January 2018

Identifiers

DOI

10.1111/TPJ.12329

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17 December 2017

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17 December 2017