(Q46023362)

18 December 2017

title

Electrostatic basis for bioenergetics. (English)

1 reference

18 December 2017

4

Arieh Warshel

1 reference

18 December 2017

Avital Shurki

1

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18 December 2017

Marek Strajbl

series ordinal

2

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18 December 2017

Claudia N Schutz

series ordinal

3

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18 December 2017

language of work or name

English

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publication date

1 January 2004

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18 December 2017

published in

Methods in Enzymology

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18 December 2017

volume

380

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18 December 2017

page(s)

52-84

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18 December 2017

Coupling of phosphorylation to electron and hydrogen transfer by a chemi-osmotic type of mechanism

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Electrostatic origin of the catalytic power of enzymes and the role of preorganized active sites

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7 January 2021

Selective stabilization of the chorismate mutase transition state by a positively charged hydrogen bond donor

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7 January 2021

Theoretical studies of enzymic reactions: dielectric, electrostatic and steric stabilization of the carbonium ion in the reaction of lysozyme

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7 January 2021

Energetics of enzyme catalysis

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7 January 2021

Calculations of antibody-antigen interactions: microscopic and semi-microscopic evaluation of the free energies of binding of phosphorylcholine analogs to McPC603

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7 January 2021

Calculations of electrostatic interactions in biological systems and in solutions

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7 January 2021

On the Theory of Oxidation‐Reduction Reactions Involving Electron Transfer. I

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7 January 2021

Computer simulation of the triosephosphate isomerase catalyzed reaction

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7 January 2021

Crystal structure of a lysozyme-tetrasaccharide lactone complex

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7 January 2021

A view at the millennium: the efficiency of enzymatic catalysis

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7 January 2021

Dynamics of biochemical and biophysical reactions: insight from computer simulations

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7 January 2021

How much do enzymes really gain by restraining their reacting fragments?

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7 January 2021

Substrate conformational transitions in the active site of chorismate mutase: their role in the catalytic mechanism

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7 January 2021

The mechanism of catalysis of the chorismate to prephenate reaction by the Escherichia coli mutase enzyme

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7 January 2021

Enzymes do what is expected (chalcone isomerase versus chorismate mutase).

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7 January 2021

Just a near attack conformer for catalysis (chorismate to prephenate rearrangements in water, antibody, enzymes, and their mutants).

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7 January 2021

Apparent NAC effect in chorismate mutase reflects electrostatic transition state stabilization

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7 January 2021

Remarkable rate enhancement of orotidine 5'-monophosphate decarboxylase is due to transition-state stabilization rather than to ground-state destabilization.

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7 January 2021

Elucidating the nature of enzyme catalysis utilizing a new twist on an old methodology: quantum mechanical-free energy calculations on chemical reactions in enzymes and in aqueous solution

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7 January 2021

So do we understand how enzymes work?

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7 January 2021

Mechanisms of thiamine-catalyzed reactions. Decarboxylation of 2-(1-carboxy-l-hydroxyethyl)-3,4-dimethylthiazolium chloride

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7 January 2021

A proficient enzyme revisited: the predicted mechanism for orotidine monophosphate decarboxylase

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7 January 2021

Alternative view of enzyme reactions

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7 January 2021

Non-enzymatic and enzymatic hydrolysis of alkyl halides: a haloalkane dehalogenation enzyme evolved to stabilize the gas-phase transition state of an SN2 displacement reaction

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7 January 2021

Crystal structure of the thiamin diphosphate-dependent enzyme pyruvate decarboxylase from the yeast Saccharomyces cerevisiae at 2.3 A resolution

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7 January 2021

Remarkable stabilization of zwitterionic intermediates may account for a billion-fold rate acceleration by thiamin diphosphate-dependent decarboxylases

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7 January 2021

What about protein polarity?

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7 January 2021

Electrostatic effects in macromolecules: fundamental concepts and practical modeling

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7 January 2021

Macroscopic models for studies of electrostatic interactions in proteins: limitations and applicability

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7 January 2021

Computer simulations of enzyme catalysis: finding out what has been optimized by evolution.

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7 January 2021

Electrostatic stress in catalysis: Structure and mechanism of the enzyme orotidine monophosphate decarboxylase

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7 January 2021

Quantum mechanical methods for enzyme kinetics

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7 January 2021

Catalytic proficiency: the unusual case of OMP decarboxylase

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7 January 2021

Combined QM/MM study of the mechanism and kinetic isotope effect of the nucleophilic substitution reaction in haloalkane dehalogenase

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7 January 2021

Atomic coordinates for subtilisin BPN′ (or Novo)

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7 January 2021

Evaluation of catalytic free energies in genetically modified proteins

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7 January 2021

Free energy perturbation calculations on binding and catalysis after mutating Asn 155 in subtilisin

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7 January 2021

Transition-state stabilization in the mechanism of tyrosyl-tRNA synthetase revealed by protein engineering

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7 January 2021

Engineering subtilisin BPN' for site-specific proteolysis.

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7 January 2021

Low-barrier hydrogen bonds and enzymic catalysis

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7 January 2021

A low-barrier hydrogen bond in the catalytic triad of serine proteases

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7 January 2021

The low barrier hydrogen bond in enzymatic catalysis.

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7 January 2021

Energy considerations show that low-barrier hydrogen bonds do not offer a catalytic advantage over ordinary hydrogen bonds

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7 January 2021

How do serine proteases really work?

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7 January 2021

A low-barrier hydrogen bond in the catalytic triad of serine proteases? Theory versus experiment

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7 January 2021

A new concept for the mechanism of action of chymotrypsin: the role of the low-barrier hydrogen bond

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7 January 2021

Structure at 2.8 A resolution of F1-ATPase from bovine heart mitochondria

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7 January 2021

Energy transduction in ATP synthase

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7 January 2021

Transient accumulation of elastic energy in proton translocating ATP synthase

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7 January 2021

Simulations of ion current in realistic models of ion channels: the KcsA potassium channel

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7 January 2021

What are the dielectric "constants" of proteins and how to validate electrostatic models?

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7 January 2021

Calculations of enzymatic reactions: calculations of pKa, proton transfer reactions, and general acid catalysis reactions in enzymes.

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7 January 2021

Why nature chose phosphates

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7 January 2021

G proteins, effectors and GAPs: structure and mechanism

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7 January 2021

Nucleoside triphosphate-binding proteins: different scaffolds to achieve phosphoryl transfer

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7 January 2021

Signal transduction pathways involving Ras. Mini review

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7 January 2021

On the mechanism of guanosine triphosphate hydrolysis in ras p21 proteins

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7 January 2021

Why have mutagenesis studies not located the general base in ras p21.

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7 January 2021

Electrostatic control of GTP and GDP binding in the oncoprotein p21ras

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7 January 2021

Mechanistic analysis of the observed linear free energy relationships in p21ras and related systems.

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7 January 2021

Linear free energy relationships in the intrinsic and GTPase activating protein-stimulated guanosine 5'-triphosphate hydrolysis of p21ras.

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7 January 2021

How does GAP catalyze the GTPase reaction of Ras? A computer simulation study

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7 January 2021

Structure of the photosynthetic reaction centre from Rhodobacter sphaeroides at 2.65 A resolution: cofactors and protein-cofactor interactions

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7 January 2021

Proton transfer in reaction centers from photosynthetic bacteria

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7 January 2021

Conversion of light energy to electrostatic energy in the proton pump of Halobacterium halobium

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7 January 2021

Permeation of ions across the potassium channel: Brownian dynamics studies

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7 January 2021

Electrostatic control of the efficiency of light-induced electron transfer across membranes

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https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980003-X

7 January 2021

Structure of the protein subunits in the photosynthetic reaction centre of Rhodopseudomonas viridis at 3Å resolution

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7 January 2021

Protein Control of Redox Potentials of Ironminus signSulfur Proteins

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7 January 2021

10.1016/S0076-6879(04)80003-X

Identifiers

DOI

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18 December 2017

1 reference

18 December 2017