(Q46279817)

English

Complex evolutionary relationships among four classes of modular RNA-binding splicing regulators in eukaryotes: the hnRNP, SR, ELAV-like and CELF proteins

scientific article published on 24 November 2012

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

Complex evolutionary relationships among four classes of modular RNA-binding splicing regulators in eukaryotes: the hnRNP, SR, ELAV-like and CELF proteins (English)

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

Joseph A Rothnagel

5

object named as

Joseph A Rothnagel

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

author name string

Yue Hang Tang

1

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

Siew Ping Han

2

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

Karin S Kassahn

3

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

Adam Skarshewski

4

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

Ross Smith

6

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

publication date

24 November 2012

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Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

Journal of Molecular Evolution

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Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

75

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Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

5-6

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

214-228

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

https://scigraph.springernature.com/pub.10.1007/s00239-012-9533-0

0 references

Comparative genomics and evolution of proteins involved in RNA metabolism

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Origin of multicellular eukaryotes - insights from proteome comparisons.

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21 January 2018

Systematic genome-wide annotation of spliceosomal proteins reveals differential gene family expansion

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21 January 2018

Genome-wide analysis of alternative pre-mRNA splicing

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21 January 2018

New insights into the auxiliary domains of eukaryotic RNA binding proteins.

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21 January 2018

Analysis of the RNA-recognition motif and RS and RGG domains: conservation in metazoan pre-mRNA splicing factors

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21 January 2018

Mechanisms of alternative pre-messenger RNA splicing

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21 January 2018

Genome-wide analysis of alternative pre-mRNA splicing and RNA-binding specificities of the Drosophila hnRNP A/B family members

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21 January 2018

Evolution of SR protein and hnRNP splicing regulatory factors

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Listening to silence and understanding nonsense: exonic mutations that affect splicing

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Studying alternative splicing regulatory networks through partial correlation analysis

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21 January 2018

Proteomic analysis of in vivo-assembled pre-mRNA splicing complexes expands the catalog of participating factors

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21 January 2018

Genomic and structural aspects of protein evolution

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Reorganizing the protein space at the Universal Protein Resource (UniProt)

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WebLogo: A Sequence Logo Generator

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The importance of CELF control: molecular and biological roles of the CUG-BP, Elav-like family of RNA-binding proteins

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21 January 2018

Crystal structure of the two-RRM domain of hnRNP A1 (UP1) complexed with single-stranded telomeric DNA

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21 January 2018

NMR structure of the three quasi RNA recognition motifs (qRRMs) of human hnRNP F and interaction studies with Bcl-x G-tract RNA: a novel mode of RNA recognition

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hnRNP proteins and the biogenesis of mRNA

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Messenger-RNA-binding proteins and the messages they carry

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MUSCLE: a multiple sequence alignment method with reduced time and space complexity

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MUSCLE: multiple sequence alignment with high accuracy and high throughput

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Structural trees for protein superfamilies

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An efficient algorithm for large-scale detection of protein families

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Contributions of the RNA-binding and linker domains and RNA structure to the specificity and affinity of the nucleolin RBD12/NRE interaction.

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A conserved family of elav-like genes in vertebrates

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Convergent evolution of domain architectures (is rare).

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A case of convergent evolution of nucleic acid binding modules

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Functional implications of the emergence of alternative splicing in hnRNP A/B transcripts

1 reference

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21 January 2018

Functional diversity of the hnRNPs: past, present and perspectives

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Quantifying the similarities within fold space

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Incorporating evolutionary information and functional domains for identifying RNA splicing factors in humans

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Integrative genome-wide analysis reveals cooperative regulation of alternative splicing by hnRNP proteins

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Infrastructure for the life sciences: design and implementation of the UniProt website

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Mass spectroscopy identifies the splicing-associated proteins, PSF, hnRNP H3, hnRNP A2/B1, and TLS/FUS as interacting partners of the ZNF198 protein associated with rearrangement in myeloproliferative disease

1 reference

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Alternative splicing and evolution: diversification, exon definition and function

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21 January 2018

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The CELF family of RNA binding proteins is implicated in cell-specific and developmentally regulated alternative splicing

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The SR protein family of splicing factors: master regulators of gene expression

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RNA-binding proteins: modular design for efficient function

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On the evolution of protein folds: are similar motifs in different protein folds the result of convergence, insertion, or relics of an ancient peptide world?

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Alternative pre-mRNA splicing and proteome expansion in metazoans

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Immunopurification of heterogeneous nuclear ribonucleoprotein particles reveals an assortment of RNA-binding proteins.

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Large-scale proteomic analysis of the human spliceosome

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Protein family expansions and biological complexity

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1 reference

https://pubmed.ncbi.nlm.nih.gov/23179353

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

hnRNP proteins and splicing control.

1 reference

https://pubmed.ncbi.nlm.nih.gov/23179353

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

TreeView: an application to display phylogenetic trees on personal computers

1 reference

https://pubmed.ncbi.nlm.nih.gov/23179353

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy

1 reference

https://pubmed.ncbi.nlm.nih.gov/23179353

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

1H, 13C, and 15N NMR assignments and global folding pattern of the RNA-binding domain of the human hnRNP C proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/23179353

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/S00239-012-9533-0

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/23179353

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