(Q47644252)

4 February 2018

title

Design Principles of Phosphorylation-Dependent Timekeeping in Eukaryotic Circadian Clocks (English)

1 reference

4 February 2018

0 references

1 reference

Koji L Ode

1

1 reference

4 February 2018

Hiroki R Ueda

series ordinal

2

1 reference

4 February 2018

publication date

16 October 2017

1 reference

4 February 2018

Cold Spring Harbor Perspectives in Biology

published in

1 reference

4 February 2018

Metabolic and nontranscriptional circadian clocks: eukaryotes

cites work

1 reference

12 December 2020

Control of mammalian circadian rhythm by CKIepsilon-regulated proteasome-mediated PER2 degradation.

1 reference

12 December 2020

Setting the pace of the Neurospora circadian clock by multiple independent FRQ phosphorylation events

1 reference

12 December 2020

Circadian transcription contributes to core period determination in Drosophila

1 reference

12 December 2020

PERspective on PER phosphorylation

1 reference

12 December 2020

Real-time luminescence reporting of circadian gene expression in mammals.

1 reference

12 December 2020

Multiscale complexity in the mammalian circadian clock

1 reference

12 December 2020

Circadian conformational change of the Neurospora clock protein FREQUENCY triggered by clustered hyperphosphorylation of a basic domain.

1 reference

12 December 2020

The tau mutation affects temperature compensation of hamster retinal circadian oscillators

1 reference

12 December 2020

Timing control in regulatory networks by multisite protein modifications

1 reference

12 December 2020

Ultrasensitivity part II: multisite phosphorylation, stoichiometric inhibitors, and positive feedback

1 reference

12 December 2020

Systems Biology-Derived Discoveries of Intrinsic Clocks

1 reference

12 December 2020

Phosphorylation variation during the cell cycle scales with structural propensities of proteins

1 reference

12 December 2020

Circadian integration of metabolism and energetics

1 reference

12 December 2020

A Period2 Phosphoswitch Regulates and Temperature Compensates Circadian Period

1 reference

12 December 2020

FAD Regulates CRYPTOCHROME Protein Stability and Circadian Clock in Mice

1 reference

12 December 2020

Tick Tock: Circadian Regulation of Plant Innate Immunity

1 reference

12 December 2020

A Cryptochrome 2 mutation yields advanced sleep phase in humans

1 reference

12 December 2020

Differential effects of PER2 phosphorylation: molecular basis for the human familial advanced sleep phase syndrome (FASPS)

1 reference

12 December 2020

A role for casein kinase 2alpha in the Drosophila circadian clock

1 reference

12 December 2020

Systematic investigation of hierarchical phosphorylation by protein kinase CK2.

1 reference

12 December 2020

Circadian mutant Overtime reveals F-box protein FBXL3 regulation of cryptochrome and period gene expression

1 reference

12 December 2020

The functional interplay between protein kinase CK2 and CCA1 transcriptional activity is essential for clock temperature compensation in Arabidopsis

1 reference

12 December 2020

Global analysis of Cdk1 substrate phosphorylation sites provides insights into evolution

1 reference

12 December 2020

Phosphate groups as substrate determinants for casein kinase I action

1 reference

12 December 2020

A role for CK2 in the Drosophila circadian oscillator

1 reference

12 December 2020

ATPase activity and its temperature compensation of the cyanobacterial clock protein KaiC.

1 reference

12 December 2020

A design principle for a posttranslational biochemical oscillator

1 reference

12 December 2020

1 reference

12 December 2020

Circadian clocks in human red blood cells

1 reference

12 December 2020

Delay in feedback repression by cryptochrome 1 is required for circadian clock function

1 reference

12 December 2020

Cycling of CRYPTOCHROME proteins is not necessary for circadian-clock function in mammalian fibroblasts

1 reference

12 December 2020

Functional consequences of a CKIdelta mutation causing familial advanced sleep phase syndrome

1 reference

12 December 2020

Peroxiredoxins are conserved markers of circadian rhythms

1 reference

12 December 2020

Individual neurons dissociated from rat suprachiasmatic nucleus express independently phased circadian firing rhythms

1 reference

12 December 2020

Emerging models for the molecular basis of mammalian circadian timing

1 reference

12 December 2020

Involvement of the protein kinase CK2 in the regulation of mammalian circadian rhythms.

1 reference

12 December 2020

The doubletime and CKII kinases collaborate to potentiate Drosophila PER transcriptional repressor activity

1 reference

12 December 2020

Phosphorylation Regulating the Ratio of Intracellular CRY1 Protein Determines the Circadian Period

1 reference

12 December 2020

A chemical biology approach reveals period shortening of the mammalian circadian clock by specific inhibition of GSK-3beta

1 reference

12 December 2020

Ultradeep human phosphoproteome reveals a distinct regulatory nature of Tyr and Ser/Thr-based signaling

1 reference

12 December 2020

Expression of a gene cluster kaiABC as a circadian feedback process in cyanobacteria.

1 reference

12 December 2020

Functional anthology of intrinsic disorder. 3. Ligands, post-translational modifications, and diseases associated with intrinsically disordered proteins.

1 reference

12 December 2020

Post-translational regulation of the Drosophila circadian clock requires protein phosphatase 1 (PP1)

1 reference

12 December 2020

A synthetic oscillatory network of transcriptional regulators

1 reference

12 December 2020

CK2 phosphorylation of CCA1 is necessary for its circadian oscillator function in Arabidopsis

1 reference

12 December 2020

Knockout-Rescue Embryonic Stem Cell-Derived Mouse Reveals Circadian-Period Control by Quality and Quantity of CRY1.

1 reference

12 December 2020

A PEST-like element in FREQUENCY determines the length of the circadian period in Neurospora crassa

1 reference

12 December 2020

Identification of small molecule activators of cryptochrome

1 reference

12 December 2020

C-H activation generates period-shortening molecules that target cryptochrome in the mammalian circadian clock.

1 reference

12 December 2020

Role of cyclic mPer2 expression in the mammalian cellular clock

1 reference

12 December 2020

Signal processing in cellular clocks

1 reference

12 December 2020

Phosphorylation of FREQUENCY protein by casein kinase II is necessary for the function of the Neurospora circadian clock

1 reference

12 December 2020

Temperature-Sensitive Substrate and Product Binding Underlie Temperature-Compensated Phosphorylation in the Clock

1 reference

12 December 2020

Temporal phosphorylation of the Drosophila period protein

1 reference

12 December 2020

Multiple layers of posttranslational regulation refine circadian clock activity in Arabidopsis

1 reference

12 December 2020

CKIepsilon/delta-dependent phosphorylation is a temperature-insensitive, period-determining process in the mammalian circadian clock

1 reference

12 December 2020

An hPer2 phosphorylation site mutation in familial advanced sleep phase syndrome

1 reference

12 December 2020

double-time is a novel Drosophila clock gene that regulates PERIOD protein accumulation

1 reference

12 December 2020

GSK-3 and CK2 Kinases Converge on Timeless to Regulate the Master Clock

1 reference

12 December 2020

Phosphorylation of the Neurospora clock protein FREQUENCY determines its degradation rate and strongly influences the period length of the circadian clock

1 reference

12 December 2020

Alternative initiation of translation and time-specific phosphorylation yield multiple forms of the essential clock protein FREQUENCY.

1 reference

12 December 2020

PER2 Differentially Regulates Clock Phosphorylation versus Transcription by Reciprocal Switching of CK1ε Activity

1 reference

12 December 2020

GSK3 takes centre stage more than 20 years after its discovery

1 reference

12 December 2020

The phospho-occupancy of an atypical SLIMB-binding site on PERIOD that is phosphorylated by DOUBLETIME controls the pace of the clock.

1 reference

12 December 2020

Circadian rhythms. Atomic-scale origins of slowness in the cyanobacterial circadian clock

1 reference

12 December 2020

Structure and function of animal cryptochromes.

1 reference

12 December 2020

Circadian rhythms persist without transcription in a eukaryote

1 reference

12 December 2020

Stochastic simulation of the mammalian circadian clock

1 reference

12 December 2020

The Adaptive Value of Circadian Clocks

1 reference

12 December 2020

Multisite protein phosphorylation--from molecular mechanisms to kinetic models

1 reference

12 December 2020

(Re)inventing the circadian feedback loop

1 reference

12 December 2020

Design principles of biochemical oscillators

1 reference

12 December 2020

Conserved RNA helicase FRH acts nonenzymatically to support the intrinsically disordered neurospora clock protein FRQ.

1 reference

12 December 2020

Kinetics of doubletime kinase-dependent degradation of the Drosophila period protein

1 reference

12 December 2020

Non-optimal codon usage is a mechanism to achieve circadian clock conditionality.

1 reference

12 December 2020

A role for the segment polarity gene shaggy/GSK-3 in the Drosophila circadian clock

1 reference

12 December 2020

RNA-methylation-dependent RNA processing controls the speed of the circadian clock

1 reference

12 December 2020

Post-translational regulation of the Arabidopsis circadian clock through selective proteolysis and phosphorylation of pseudo-response regulator proteins.

1 reference

12 December 2020

A global convergence result for processive multisite phosphorylation systems.

1 reference

12 December 2020

Competing E3 ubiquitin ligases govern circadian periodicity by degradation of CRY in nucleus and cytoplasm

1 reference

12 December 2020

Protein sequestration versus Hill-type repression in circadian clock models.

1 reference

12 December 2020

A large-scale functional RNAi screen reveals a role for CK2 in the mammalian circadian clock.

1 reference

12 December 2020

Structures of the cyanobacterial circadian oscillator frozen in a fully assembled state.

1 reference

12 December 2020

Structural basis of the day-night transition in a bacterial circadian clock

1 reference

12 December 2020

An inducible promoter fused to the period gene in Drosophila conditionally rescues adult per-mutant arrhythmicity.

1 reference

12 December 2020

An allosteric model of circadian KaiC phosphorylation

1 reference

12 December 2020

Central and peripheral circadian clocks in mammals

1 reference

12 December 2020

The Plant Circadian Clock: From a Simple Timekeeper to a Complex Developmental Manager

1 reference

12 December 2020

Posttranslational mechanisms regulate the mammalian circadian clock

1 reference

12 December 2020

Ordered phosphorylation governs oscillation of a three-protein circadian clock

1 reference

12 December 2020

The importance of intrinsic disorder for protein phosphorylation

1 reference

12 December 2020

Dependence of the period on the rate of protein degradation in minimal models for circadian oscillations.

1 reference

12 December 2020

Role of molecular oscillations in generating behavioral rhythms in Drosophila.

1 reference

12 December 2020

Dual KaiC-based oscillations constitute the circadian system of cyanobacteria

1 reference

12 December 2020

Metabolic Cycles in Yeast Share Features Conserved among Circadian Rhythms

1 reference

12 December 2020

Unwinding the differences of the mammalian PERIOD clock proteins from crystal structure to cellular function

1 reference

12 December 2020

Flexibility of the C-terminal, or CII, ring of KaiC governs the rhythm of the circadian clock of cyanobacteria

1 reference

12 December 2020

Rhythmic post-transcriptional regulation of the circadian clock protein mPER2 in mammalian cells: a real-time analysis

1 reference

12 December 2020

The Drosophila clock gene double-time encodes a protein closely related to human casein kinase Iepsilon

1 reference

12 December 2020

A genome-wide RNAi screen for modifiers of the circadian clock in human cells

1 reference

12 December 2020

Circadian gene expression in individual fibroblasts: cell-autonomous and self-sustained oscillators pass time to daughter cells

1 reference

12 December 2020

High-throughput chemical screen identifies a novel potent modulator of cellular circadian rhythms and reveals CKIα as a clock regulatory kinase

1 reference

12 December 2020

SCFbeta-TRCP controls clock-dependent transcription via casein kinase 1-dependent degradation of the mammalian period-1 (Per1) protein

1 reference

12 December 2020

Mutation of the Human Circadian Clock Gene CRY1 in Familial Delayed Sleep Phase Disorder

1 reference

12 December 2020

The circadian regulatory proteins BMAL1 and cryptochromes are substrates of casein kinase Iepsilon

1 reference

12 December 2020

A role for casein kinase 2 in the mechanism underlying circadian temperature compensation

1 reference

12 December 2020

Protein kinase CK2 interacts with and phosphorylates the Arabidopsis circadian clock-associated 1 protein.

1 reference

12 December 2020

Post-translational modifications regulate the ticking of the circadian clock.

1 reference

12 December 2020

Tipin and Timeless form a mutually protective complex required for genotoxic stress resistance and checkpoint function

1 reference

12 December 2020

Structural and dynamic aspects of protein clocks: how can they be so slow and stable?

1 reference

12 December 2020

Circadian gene expression is resilient to large fluctuations in overall transcription rates

1 reference

12 December 2020

PERIOD2::LUCIFERASE real-time reporting of circadian dynamics reveals persistent circadian oscillations in mouse peripheral tissues

1 reference

12 December 2020

Kinases and phosphatases in the mammalian circadian clock

1 reference

12 December 2020

Functional analysis of Casein Kinase 1 in a minimal circadian system

1 reference

12 December 2020

Post-translational regulation and nuclear entry of TIMELESS and PERIOD are affected in new timeless mutant

1 reference

12 December 2020

Casein kinase 1-dependent phosphorylation of familial advanced sleep phase syndrome-associated residues controls PERIOD 2 stability

1 reference

12 December 2020

Circadian rhythms. A protein fold switch joins the circadian oscillator to clock output in cyanobacteria.

1 reference

12 December 2020

A hierarchical phosphorylation cascade that regulates the timing of PERIOD nuclear entry reveals novel roles for proline-directed kinases and GSK-3beta/SGG in circadian clocks.

1 reference

12 December 2020

Transcriptional architecture of the mammalian circadian clock

1 reference

12 December 2020

Does mPER2 protein oscillate without its coding mRNA cycling?: post-transcriptional regulation by cell clock

1 reference

12 December 2020

Molecular assembly of the period-cryptochrome circadian transcriptional repressor complex.

1 reference

12 December 2020

Cooperative KaiA-KaiB-KaiC interactions affect KaiB/SasA competition in the circadian clock of cyanobacteria.

1 reference

12 December 2020

NEMO/NLK phosphorylates PERIOD to initiate a time-delay phosphorylation circuit that sets circadian clock speed

1 reference

12 December 2020

A synchronized quorum of genetic clocks

1 reference

12 December 2020

FBXL21 regulates oscillation of the circadian clock through ubiquitination and stabilization of cryptochromes

1 reference

12 December 2020

NEMO kinase contributes to core period determination by slowing the pace of the Drosophila circadian oscillator

1 reference

12 December 2020

Structural and Functional Analyses of PAS Domain Interactions of the Clock Proteins Drosophila PERIOD and Mouse PERIOD2

1 reference

12 December 2020

Systems biology of mammalian circadian clocks

1 reference

12 December 2020

Setting clock speed in mammals: the CK1 epsilon tau mutation in mice accelerates circadian pacemakers by selectively destabilizing PERIOD proteins

1 reference

12 December 2020

AMPK regulates the circadian clock by cryptochrome phosphorylation and degradation

1 reference

12 December 2020

A sequential program of dual phosphorylation of KaiC as a basis for circadian rhythm in cyanobacteria

1 reference

12 December 2020

CKI and CKII mediate the FREQUENCY-dependent phosphorylation of the WHITE COLLAR complex to close the Neurospora circadian negative feedback loop

1 reference

12 December 2020

Robust circadian oscillations in growing cyanobacteria require transcriptional feedback

1 reference

12 December 2020

A promoterless period gene mediates behavioral rhythmicity and cyclical per expression in a restricted subset of the Drosophila nervous system

1 reference

12 December 2020

Quantitative proteomics reveals a dynamic interactome and phase-specific phosphorylation in the Neurospora circadian clock

1 reference

12 December 2020

Identification of diverse modulators of central and peripheral circadian clocks by high-throughput chemical screening

1 reference

12 December 2020

Phosphorylation of the cryptochrome 1 C-terminal tail regulates circadian period length

1 reference

12 December 2020

Circadian clocks and mood-related behaviors

1 reference

12 December 2020

Physicochemical properties of cells and their effects on intrinsically disordered proteins (IDPs)

1 reference

12 December 2020

Replisome progression complex links DNA replication to sister chromatid cohesion in Xenopus egg extracts.

1 reference

12 December 2020

No transcription-translation feedback in circadian rhythm of KaiC phosphorylation

1 reference

12 December 2020

The Implications of Multiple Circadian Clock Origins

1 reference

12 December 2020

Reconstitution of circadian oscillation of cyanobacterial KaiC phosphorylation in vitro

1 reference

12 December 2020

Molecular mechanisms of the biological clock in cultured fibroblasts

1 reference

12 December 2020

Functioning and robustness of a bacterial circadian clock

1 reference

12 December 2020

Non-transcriptional oscillators in circadian timekeeping

1 reference

12 December 2020

Integrating circadian dynamics with physiological processes in plants.

1 reference

12 December 2020

DYRK1A and glycogen synthase kinase 3beta, a dual-kinase mechanism directing proteasomal degradation of CRY2 for circadian timekeeping

1 reference

12 December 2020

Multistep phosphorylation systems: tunable components of biological signaling circuits

1 reference

12 December 2020

Circadian rhythms: mechanisms and therapeutic implications

1 reference

12 December 2020

ATPase activity of KaiC determines the basic timing for circadian clock of cyanobacteria

1 reference

12 December 2020

Positional syntenic cloning and functional characterization of the mammalian circadian mutation tau.

1 reference

12 December 2020

Circadian rhythms in Drosophila can be driven by period expression in a restricted group of central brain cells.

1 reference

12 December 2020

Intrinsically disordered proteins in cellular signalling and regulation.

1 reference

12 December 2020

In vitro regulation of circadian phosphorylation rhythm of cyanobacterial clock protein KaiC by KaiA and KaiB.

1 reference

12 December 2020

Understanding systems-level properties: timely stories from the study of clocks

1 reference

12 December 2020

Mass spectrometry-based absolute quantification reveals rhythmic variation of mouse circadian clock proteins

1 reference

12 December 2020

A Slow Conformational Switch in the BMAL1 Transactivation Domain Modulates Circadian Rhythms.

1 reference

12 December 2020

A role for protein kinase casein kinase2 α-subunits in the Arabidopsis circadian clock

1 reference

12 December 2020

The protein kinase CK2 is involved in regulation of circadian rhythms in Arabidopsis.

1 reference

12 December 2020

Circadian rhythms. Decoupling circadian clock protein turnover from circadian period determination

1 reference

12 December 2020

10.1101/CSHPERSPECT.A028357

Identifiers

DOI

1 reference

4 February 2018

PMC publication ID

6071485

0 references

1 reference

4 February 2018