(Q48178221)

9 February 2018

title

Model quality assessment for membrane proteins (English)

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9 February 2018

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2

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9 February 2018

Björn Wallner

series ordinal

3

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9 February 2018

Arjun Ray

object named as

Arjun Ray

series ordinal

1

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language of work or name

English

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publication date

14 October 2010

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9 February 2018

published in

Bioinformatics

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9 February 2018

volume

26

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9 February 2018

issue

24

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9 February 2018

page(s)

3067-3074

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9 February 2018

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

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1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ581

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Prediction of membrane protein structures with complex topologies using limited constraints

21 January 2018

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TOPCONS: consensus prediction of membrane protein topology

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Toward high-resolution de novo structure prediction for small proteins.

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CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

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A graph-theory algorithm for rapid protein side-chain prediction

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Environment-dependent residue contact energies for proteins.

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Verification of protein structures: patterns of nonbonded atomic interactions

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Assessment of predictions in the model quality assessment category.

21 January 2018

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Evaluation of CASP8 model quality predictions.

21 January 2018

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A study of quality measures for protein threading models

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Design of an optimal Chebyshev-expanded discrimination function for globular proteins

21 January 2018

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On the accuracy of homology modeling and sequence alignment methods applied to membrane proteins

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Knowledge-based protein secondary structure assignment

21 January 2018

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ZPRED: predicting the distance to the membrane center for residues in alpha-helical membrane proteins.

21 January 2018

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Protein secondary structure prediction based on position-specific scoring matrices

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Accurate modeling of protein conformation by automatic segment matching

21 January 2018

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A unified statistical framework for sequence comparison and structure comparison

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Community-wide assessment of GPCR structure modelling and ligand docking: GPCR Dock 2008.

21 January 2018

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MetaMQAP: a meta-server for the quality assessment of protein models.

21 January 2018

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Folding in lipid membranes (FILM): a novel method for the prediction of small membrane protein 3D structures

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Protein structure prediction using Rosetta

21 January 2018

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Comparative protein modelling by satisfaction of spatial restraints

21 January 2018

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An all-atom distance-dependent conditional probability discriminatory function for protein structure prediction

21 January 2018

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MaxSub: an automated measure for the assessment of protein structure prediction quality.

21 January 2018

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Calculation of conformational ensembles from potentials of mean force. An approach to the knowledge-based prediction of local structures in globular proteins.

21 January 2018

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Recognition of errors in three-dimensional structures of proteins

21 January 2018

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Protein homology detection by HMM-HMM comparison

21 January 2018

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UniRef: comprehensive and non-redundant UniProt reference clusters

21 January 2018

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Predicting reliable regions in protein alignments from sequence profiles.

21 January 2018

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Can correct protein models be identified?

21 January 2018

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Identification of correct regions in protein models using structural, alignment, and consensus information

21 January 2018

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https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ581

Prediction of global and local model quality in CASP7 using Pcons and ProQ.

21 January 2018

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Evaluating the absolute quality of a single protein model using structural features and support vector machines.

21 January 2018

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Scoring function for automated assessment of protein structure template quality

21 January 2018

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https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ581

TM-align: a protein structure alignment algorithm based on the TM-score

21 January 2018

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Structure modeling of all identified G protein-coupled receptors in the human genome

21 January 2018

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https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ581

Protein structure prediction: when is it useful?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ581

Automatic consensus-based fold recognition using Pcons, ProQ, and Pmodeller

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ581

10.1093/BIOINFORMATICS/BTQ581

21 January 2018

Identifiers

DOI

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9 February 2018

journals/bioinformatics/RayLW10

DBLP publication ID

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DBLP Dataset 2021-01-02

28 January 2021

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9 February 2018