(Q48318996)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29296019%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

title

Extreme haplotype variation in the desiccation-tolerant clubmoss Selaginella lepidophylla (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29296019%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

main subject

Selaginella lepidophylla

object named as

Selaginella lepidophylla

1 reference

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29296019%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

Robert VanBuren

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29296019%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

Shujun Ou

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29296019%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

Jeremy Pardo

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29296019%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

Todd C Mockler

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29296019%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

author name string

Ching Man Wai

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29296019%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

Doug Bryant

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29296019%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

Ning Jiang

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29296019%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

Patrick Edger

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29296019%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

language of work or name

English

0 references

publication date

2 January 2018

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29296019%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

published in

Nature Communications

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29296019%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

volume

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29296019%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

issue

1

1 reference

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8 April 2020

page(s)

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29296019%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

8 April 2020

copyright license

start time

2 January 2018

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

exact match

https://scigraph.springernature.com/pub.10.1038/s41467-017-02546-5

0 references

cites work

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22 May 2018

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The Small Nuclear Genomes of Selaginella Are Associated with a Low Rate of Genome Size Evolution

22 May 2018

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22 May 2018

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Trehalose Accumulation Triggers Autophagy during Plant Desiccation

22 May 2018

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Single-molecule sequencing of the desiccation-tolerant grass Oropetium thomaeum

22 May 2018

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UniProtKB/Swiss-Prot, the Manually Annotated Section of the UniProt KnowledgeBase: How to Use the Entry View

22 May 2018

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OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy

22 May 2018

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BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

22 May 2018

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The resurrection genome of Boea hygrometrica: A blueprint for survival of dehydration

22 May 2018

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Progress, challenges and the future of crop genomes

22 May 2018

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StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

22 May 2018

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A metacalibrated time-tree documents the early rise of flowering plant phylogenetic diversity.

22 May 2018

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Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement

22 May 2018

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Trimmomatic: a flexible trimmer for Illumina sequence data

22 May 2018

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Desiccation tolerance in resurrection plants: new insights from transcriptome, proteome and metabolome analysis

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

Architecture and evolution of a minute plant genome.

22 May 2018

1 reference

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Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data

22 May 2018

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22 May 2018

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Molecular mechanisms of desiccation tolerance in the resurrection glacial relic Haberlea rhodopensis.

22 May 2018

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22 May 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

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22 May 2018

1 reference

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22 May 2018

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Accelerated Profile HMM Searches

22 May 2018

1 reference

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The Selaginella genome identifies genetic changes associated with the evolution of vascular plants

22 May 2018

1 reference

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Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications.

22 May 2018

1 reference

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Ancestral polyploidy in seed plants and angiosperms

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

MITE-Hunter: a program for discovering miniature inverted-repeat transposable elements from genomic sequences

22 May 2018

1 reference

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The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

Genome-wide evolutionary analysis of eukaryotic DNA methylation.

22 May 2018

1 reference

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BEDTools: a flexible suite of utilities for comparing genomic features

22 May 2018

1 reference

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Selaginella and 400 million years of separation

22 May 2018

1 reference

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TopHat: discovering splice junctions with RNA-Seq

22 May 2018

1 reference

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WGCNA: an R package for weighted correlation network analysis

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

How to usefully compare homologous plant genes and chromosomes as DNA sequences

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

LTRharvest, an efficient and flexible software for de novo detection of LTR retrotransposons

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

MAKER: an easy-to-use annotation pipeline designed for emerging model organism genomes

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

LTR_FINDER: an efficient tool for the prediction of full-length LTR retrotransposons

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

The gene balance hypothesis: from classical genetics to modern genomics

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

Evolution of DNA amounts across land plants (embryophyta)

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

Rapid recent growth and divergence of rice nuclear genomes

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

Versatile and open software for comparing large genomes

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

Early light-induced proteins protect Arabidopsis from photooxidative stress

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica)

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

Tandem repeats finder: a program to analyze DNA sequences

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

LTR_retriever: a highly accurate and sensitive program for identification of long terminal-repeat retrotransposons.

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

Evolutionary patterns of genic DNA methylation vary across land plants.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

Plant genome size variation: bloating and purging DNA.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

Two-phase resolution of polyploidy in the Arabidopsis metabolic network gives rise to relative and absolute dosage constraints

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

Synteny and Collinearity in Plant Genomes

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5750206

Using RepeatMasker to identify repetitive elements in genomic sequences

29 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FS41467-017-02546-5

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/S41467-017-02546-5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29296019%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29296019%20AND%20SRC:MED&resulttype=core&format=json

8 April 2020

1 reference