(Q49079424)

18 February 2018

title

Systematic structural characterization of metabolites in Arabidopsis via candidate substrate-product pair networks. (English)

1 reference

18 February 2018

author

Yvan Saeys

2

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18 February 2018

Yves Van de Peer

5

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18 February 2018

Wout Boerjan

9

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18 February 2018

Ruben Vanholme

6

object named as

Ruben Vanholme

1 reference

18 February 2018

Kris Morreel

1

object named as

Kris Morreel

1 reference

18 February 2018

Bartel Vanholme

8

object named as

Bartel Vanholme

1 reference

18 February 2018

author name string

Oana Dima

3

1 reference

18 February 2018

Fachuang Lu

4

1 reference

18 February 2018

John Ralph

7

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18 February 2018

publication date

31 March 2014

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18 February 2018

published in

The Plant Cell

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18 February 2018

volume

26

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18 February 2018

page(s)

929-945

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18 February 2018

issue

3

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18 February 2018

Optimization and testing of mass spectral library search algorithms for compound identification

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Proposed minimum reporting standards for chemical analysis

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Inferring gene functions through dissection of relevance networks: interleaving the intra- and inter-species views

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Metabolite Identification Using Automated Comparison of High-Resolution Multistage Mass Spectral Trees

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Identifying the Unknowns by Aligning Fragmentation Trees

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Computational mass spectrometry for metabolomics: identification of metabolites and small molecules

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Mass spectrometry-based fragmentation as an identification tool in lignomics

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Isolation and structure elucidation of 5'-O-beta-D-glucopyranosyl-dihydroascorbigen from Cardamine diphylla rhizome

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

MassBank: a public repository for sharing mass spectral data for life sciences

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

In silico fragmentation for computer assisted identification of metabolite mass spectra

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Biosynthesis of glucosinolates--gene discovery and beyond

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Protein function annotation by homology-based inference

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Class targeted metabolomics: ESI ion trap screening methods for glucosinolates based on MSn fragmentation

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Metabolite annotations based on the integration of mass spectral information

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Consistency analysis of metabolic correlation networks

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

The future of metabolic phytochemistry: larger numbers of metabolites, higher resolution, greater understanding

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Towards fully automated structure-based function prediction in structural genomics: a case study

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Biology and biochemistry of glucosinolates

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Metabolomic database annotations via query of elemental compositions: mass accuracy is insufficient even at less than 1 ppm

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

METLIN: a metabolite mass spectral database

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

The secondary metabolism of Arabidopsis thaliana: growing like a weed

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

GMD@CSB.DB: the Golm Metabolome Database

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Profiling of oligolignols reveals monolignol coupling conditions in lignifying poplar xylem

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Simultaneous determination of the main metabolites in rice leaves using capillary electrophoresis mass spectrometry and capillary electrophoresis diode array detection

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Profiling of Arabidopsis secondary metabolites by capillary liquid chromatography coupled to electrospray ionization quadrupole time-of-flight mass spectrometry

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Quantitative Metabolome Analysis Using Capillary Electrophoresis Mass Spectrometry

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Observing and interpreting correlations in metabolomic networks.

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Nontargeted metabolome analysis by use of Fourier Transform Ion Cyclotron Mass Spectrometry

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Analysis of highly polar compounds of plant origin: combination of hydrophilic interaction chromatography and electrospray ion trap mass spectrometry.

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Determination of flavone, flavonol, and flavanone aglycones by negative ion liquid chromatography electrospray ion trap mass spectrometry

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Negative atmospheric pressure chemical ionisation low-energy collision activation mass spectrometry for the characterisation of flavonoids in extracts of fresh herbs

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Metabolic profiling allows comprehensive phenotyping of genetically or environmentally modified plant systems

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Metabolite profiling for plant functional genomics

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

The large-scale organization of metabolic networks

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

'Metabonomics': understanding the metabolic responses of living systems to pathophysiological stimuli via multivariate statistical analysis of biological NMR spectroscopic data

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Systematic functional analysis of the yeast genome

5 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4001402

Characterisation of glucosinolates using electrospray ion trap and electrospray quadrupole time-of-flight mass spectrometry

5 October 2018

1 reference

12 December 2020

Metabolite profiling: from diagnostics to systems biology

1 reference

12 December 2020

Phytochemistry meets genome analysis, and beyond

1 reference

12 December 2020

AtMetExpress development: a phytochemical atlas of Arabidopsis development

1 reference

12 December 2020

Assessing the effect of reactive oxygen species on Escherichia coli using a metabolome approach

1 reference

12 December 2020

Collision-induced dissociation of the A + 2 isotope ion facilitates glucosinolates structure elucidation by electrospray ionization-tandem mass spectrometry with a linear quadrupole ion trap

1 reference

12 December 2020

Identifiers

DOI

10.1105/TPC.113.122242

1 reference

18 February 2018

release_3jpiva32ujcj7a5nyrmwv74sdu

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/3jpiva32ujcj7a5nyrmwv74sdu

24 November 2022

mapped directly with Wikidata item

0 references

1 reference

18 February 2018