(Q49850977)

22 February 2018

http://europepmc.org/abstract/MED/29457792

title

On the design of CRISPR-based single-cell molecular screens. (English)

1 reference

22 February 2018

http://europepmc.org/abstract/MED/29457792

main subject

CRISPR

0 references

molecular design

0 references

single cell transcriptomics

1 reference

A curated database reveals trends in single-cell transcriptomics

7 February 2021

https://www.nxn.se/single-cell-studies/data.tsv

author

Andrew J Hill

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29457792%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

Kenneth A Matreyek

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29457792%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

Jonathan S Packer

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29457792%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

Cole Trapnell

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29457792%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

8

Jay Shendure

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29457792%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

author name string

José L McFaline-Figueroa

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29457792%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

Lea M Starita

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29457792%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

Molly J Gasperini

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29457792%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

Dana Jackson

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29457792%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

publication date

19 February 2018

1 reference

22 February 2018

http://europepmc.org/abstract/MED/29457792

published in

Nature Methods

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29457792%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

volume

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29457792%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

issue

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29457792%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

page(s)

271-274

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29457792%20AND%20SRC:MED&resulttype=core&format=json

CRISPR/Cas9-Mediated Scanning for Regulatory Elements Required for HPRT1 Expression via Thousands of Large, Programmed Genomic Deletions.

4 June 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

Multiplexed Engineering and Analysis of Combinatorial Enhancer Activity in Single Cells

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

Synergistic drug combinations for cancer identified in a CRISPR screen for pairwise genetic interactions

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

Transcriptional interference by RNA polymerase III affects expression of the Polr3e gene.

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

Single-cell mRNA quantification and differential analysis with Census

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

Pooled CRISPR screening with single-cell transcriptome readout

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

Dissecting Immune Circuits by Linking CRISPR-Pooled Screens with Single-Cell RNA-Seq

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

A Multiplexed Single-Cell CRISPR Screening Platform Enables Systematic Dissection of the Unfolded Protein Response

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

Perturb-Seq: Dissecting Molecular Circuits with Scalable Single-Cell RNA Profiling of Pooled Genetic Screens

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

Sources of Error in Mammalian Genetic Screens.

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

Whole-organism lineage tracing by combinatorial and cumulative genome editing

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

High-throughput functional genomics using CRISPR-Cas9.

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

RNAi screening comes of age: improved techniques and complementary approaches

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

Improved vectors and genome-wide libraries for CRISPR screening

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

Dynamic imaging of genomic loci in living human cells by an optimized CRISPR/Cas system

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

Interplay between polymerase II- and polymerase III-assisted expression of overlapping genes

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

Dimeric RNA recognition regulates HIV-1 genome packaging

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

Accurately measuring recombination between closely related HIV-1 genomes

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

Morphogenesis and oncogenesis of MCF-10A mammary epithelial acini grown in three-dimensional basement membrane cultures

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

A polymorphic microsatellite that mediates induction of PIG3 by p53.

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

High rate of recombination throughout the human immunodeficiency virus type 1 genome

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

The nature of human immunodeficiency virus type 1 strand transfers

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

WAF1, a potential mediator of p53 tumor suppression

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5882576

Transfection by cationic liposomes using simultaneous single cell measurements of plasmid delivery and transgene expression

26 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNMETH.4604

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/NMETH.4604

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29457792%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

4 June 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29457792%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

1 reference