(Q50746801)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23624103%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

title

The developmental epigenomics toolbox: ChIP-seq and MethylCap-seq profiling of early zebrafish embryos (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23624103%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

0 references

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23624103%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

José Luis Gómez-Skarmeta

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23624103%20AND%20SRC:MED&resulttype=core&format=json

Elisa de la Calle-Mustienes

29 February 2020

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23624103%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

author name string

Ozren Bogdanović

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23624103%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Ana Fernández-Miñán

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23624103%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

publication date

23 April 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23624103%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23624103%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

volume

62

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23624103%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

issue

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23624103%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

page(s)

207-215

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23624103%20AND%20SRC:MED&resulttype=core&format=json

Active genes are tri-methylated at K4 of histone H3

29 February 2020

cites work

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Drosophila enhancer of Zeste/ESC complexes have a histone H3 methyltransferase activity that marks chromosomal Polycomb sites

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Histone methyltransferase activity of a Drosophila Polycomb group repressor complex

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Histone modifications at human enhancers reflect global cell-type-specific gene expression

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

A unique chromatin signature uncovers early developmental enhancers in humans

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Histone H3K27ac separates active from poised enhancers and predicts developmental state

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

ChIP-seq: using high-throughput sequencing to discover protein-DNA interactions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

ChIP-chip versus ChIP-seq: lessons for experimental design and data analysis.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Human DNA methylomes at base resolution show widespread epigenomic differences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Affinity-based enrichment strategies to assay methyl-CpG binding activity and DNA methylation in early Xenopus embryos.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

High-throughput bisulfite sequencing in mammalian genomes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Whole-genome DNA methylation profiling using MethylCap-seq.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Quantitative comparison of genome-wide DNA methylation mapping technologies.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Targets and dynamics of promoter DNA methylation during early mouse development.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

5-Hydroxymethylcytosine: a new kid on the epigenetic block?

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Characterization of MeCP2, a vertebrate DNA binding protein with affinity for methylated DNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Purification, sequence, and cellular localization of a novel chromosomal protein that binds to methylated DNA

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Temporal uncoupling of the DNA methylome and transcriptional repression during embryogenesis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Identification of cis regulatory features in the embryonic zebrafish genome through large-scale profiling of H3K4me1 and H3K4me3 binding sites

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

A hierarchy of H3K4me3 and H3K27me3 acquisition in spatial gene regulation in Xenopus embryos.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Dynamics of enhancer chromatin signatures mark the transition from pluripotency to cell specification during embryogenesis.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Prepatterning of developmental gene expression by modified histones before zygotic genome activation.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Chromatin signature of embryonic pluripotency is established during genome activation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Developmental features of DNA methylation during activation of the embryonic zebrafish genome

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Genetics and early development of zebrafish

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Genomics. Zebrafish--the canonical vertebrate

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Animal models of human disease: zebrafish swim into view

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Zebrafish promoter microarrays identify actively transcribed embryonic genes.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Model-based analysis of ChIP-Seq (MACS)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Zebrafish enhancer detection (ZED) vector: A new tool to facilitate transgenesis and the functional analysis ofcis-regulatory regions in zebrafish

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Extensive conservation of ancient microsynteny across metazoans due to cis-regulatory constraints

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

An evolutionarily conserved three-dimensional structure in the vertebrate Irx clusters facilitates enhancer sharing and coregulation.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

A functional survey of the enhancer activity of conserved non-coding sequences from vertebrate Iroquois cluster gene deserts.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Cell type-specific chromatin immunoprecipitation from multicellular complex samples using BiTS-ChIP.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Single-tube linear DNA amplification (LinDA) for robust ChIP-seq.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

De novo DNA methylation at the CpG island of the zebrafish no tail gene

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011

Chromatin structure and the inheritance of epigenetic information

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2013.04.011