(Q53079816)

11 May 2018

title

Topology-based modeling of intrinsically disordered proteins: balancing intrinsic folding and intermolecular interactions. (English)

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11 May 2018

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Debabani Ganguly

1

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11 May 2018

Jianhan Chen

series ordinal

2

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11 May 2018

language of work or name

English

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publication date

25 January 2011

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11 May 2018

published in

Proteins

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11 May 2018

volume

79

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11 May 2018

issue

4

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11 May 2018

page(s)

1251-1266

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11 May 2018

Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm

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Preformed structural elements feature in partner recognition by intrinsically unstructured proteins

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Roles of phosphorylation and helix propensity in the binding of the KIX domain of CREB-binding protein by constitutive (c-Myb) and inducible (CREB) activators

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Functional consequences of preorganized helical structure in the intrinsically disordered cell-cycle inhibitor p27(Kip1).

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Exploring the origins of topological frustration: design of a minimally frustrated model of fragment B of protein A.

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How native-state topology affects the folding of dihydrofolate reductase and interleukin-1beta

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Mechanisms of protein assembly: lessons from minimalist models

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Balancing energy and entropy: a minimalist model for the characterization of protein folding landscapes

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Simulations of beta-hairpin folding confined to spherical pores using distributed computing

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The structural basis for biphasic kinetics in the folding of the WW domain from a formin-binding protein: lessons for protein design?

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Integrating folding kinetics and protein function: biphasic kinetics and dual binding specificity in a WW domain

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Intrinsically disordered protein

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21 January 2018

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Structure of the negative regulatory domain of p53 bound to S100B(betabeta)

21 January 2018

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Analysis of an activator:coactivator complex reveals an essential role for secondary structure in transcriptional activation

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21 January 2018

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Complex network analysis of free-energy landscapes

21 January 2018

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Hidden complexity of free energy surfaces for peptide (protein) folding

21 January 2018

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Isotope labeling methods for studies of excited protein states by relaxation dispersion NMR spectroscopy

21 January 2018

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Defining the role of active-site loop fluctuations in dihydrofolate reductase catalysis

21 January 2018

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Kinetic advantage of intrinsically disordered proteins in coupled folding-binding process: a critical assessment of the "fly-casting" mechanism

21 January 2018

1 reference

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Simulating disorder-order transitions in molecular recognition of unstructured proteins: where folding meets binding

21 January 2018

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Disordered p27Kip1 exhibits intrinsic structure resembling the Cdk2/cyclin A-bound conformation

21 January 2018

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Intrinsically disordered -subunit of cGMP phosphodiesterase encodes functionally relevant transient secondary and tertiary structure

21 January 2018

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From induced fit to conformational selection: a continuum of binding mechanism controlled by the timescale of conformational transitions

21 January 2018

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Conformational selection or induced fit: a flux description of reaction mechanism

21 January 2018

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Protein folding thermodynamics and dynamics: where physics, chemistry, and biology meet

21 January 2018

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An all-atom structure-based potential for proteins: bridging minimal models with all-atom empirical forcefields

21 January 2018

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Fly-casting in protein-DNA binding: frustration between protein folding and electrostatics facilitates target recognition

21 January 2018

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Molecular Principles of the Interactions of Disordered Proteins

21 January 2018

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21 January 2018

Identifiers

DOI

10.1002/PROT.22960

1 reference

11 May 2018

1 reference

11 May 2018