(Q54293750)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25635909%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

title

Complete architecture of the archaeal RNA polymerase open complex from single-molecule FRET and NPS (English)

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29 February 2020

3

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29 February 2020

Katherine Smollett

5

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29 February 2020

Finn Werner

6

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29 February 2020

2

Dina Grohmann

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29 February 2020

author name string

Julia Nagy

1

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29 February 2020

Sarah Schulz

4

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29 February 2020

Jens Michaelis

7

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29 February 2020

language of work or name

English

0 references

publication date

30 January 2015

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29 February 2020

published in

Nature Communications

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29 February 2020

volume

6

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29 February 2020

issue

1

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page(s)

6161

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The X-ray crystal structure of RNA polymerase from Archaea

29 February 2020

cites work

1 reference

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Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

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DNA topology and a minimal set of basal factors for transcription by RNA polymerase II

21 January 2018

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Eukaryotic and archaeal TBP and TFB/TF(II)B follow different promoter DNA bending pathways

21 January 2018

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RNA polymerase II-TFIIB structure and mechanism of transcription initiation

21 January 2018

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Structure of an RNA Polymerase II-TFIIB Complex and the Transcription Initiation Mechanism

21 January 2018

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Structure and function of the initially transcribing RNA polymerase II-TFIIB complex

21 January 2018

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Mapping the location of TFIIB within the RNA polymerase II transcription preinitiation complex: a model for the structure of the PIC.

21 January 2018

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The positions of TFIIF and TFIIE in the RNA polymerase II transcription preinitiation complex.

21 January 2018

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Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometry

21 January 2018

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Architecture of the RNA polymerase II preinitiation complex and mechanism of ATP-dependent promoter opening

21 January 2018

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Molecular basis of transcription initiation in Archaea

21 January 2018

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Structural visualization of key steps in human transcription initiation

21 January 2018

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Architecture of an RNA polymerase II transcription pre-initiation complex

21 January 2018

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Evolution of multisubunit RNA polymerases in the three domains of life.

21 January 2018

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A recombinant RNA polymerase II-like enzyme capable of promoter-specific transcription

21 January 2018

1 reference

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The initiation factor TFE and the elongation factor Spt4/5 compete for the RNAP clamp during transcription initiation and elongation

21 January 2018

1 reference

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Factor requirements for transcription in the Archaeon Sulfolobus shibatae

21 January 2018

1 reference

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Photo-cross-linking of a purified preinitiation complex reveals central roles for the RNA polymerase II mobile clamp and TFIIE in initiation mechanisms.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS7161

Structure-function analysis of the RNA polymerase cleft loops elucidates initial transcription, DNA unwinding and RNA displacement

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS7161

Direct modulation of RNA polymerase core functions by basal transcription factors.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS7161

Single-molecule studies of RNA polymerases

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS7161

A nano-positioning system for macromolecular structural analysis

21 January 2018

1 reference

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Single-molecule tracking of mRNA exiting from RNA polymerase II

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS7161

Nano positioning system reveals the course of upstream and nontemplate DNA within the RNA polymerase II elongation complex

21 January 2018

1 reference

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Dynamic Architecture of a Minimal RNA Polymerase II Open Promoter Complex

21 January 2018

1 reference

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Application of the nano-positioning system to the analysis of fluorescence resonance energy transfer networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS7161

Orientation of the transcription preinitiation complex in archaea

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS7161

Structural basis of initial RNA polymerase II transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS7161

Structural basis of transcription inhibition by alpha-amanitin and implications for RNA polymerase II translocation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS7161

Analysis of the open region and of DNA-protein contacts of archaeal RNA polymerase transcription complexes during transition from initiation to elongation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS7161

Opening and closing of the bacterial RNA polymerase clamp

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS7161

Architecture of the yeast RNA polymerase II open complex and regulation of activity by TFIIF

21 January 2018

1 reference

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Evolution of complex RNA polymerases: the complete archaeal RNA polymerase structure

21 January 2018

1 reference

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Structural and functional analyses of the interaction of archaeal RNA polymerase with DNA

21 January 2018

1 reference

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Structural basis of transcription initiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS7161

Rearrangement of the RNA polymerase subunit H and the lower jaw in archaeal elongation complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS7161

Topography of the euryarchaeal transcription initiation complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS7161

Global regulation of promoter melting in naive lymphocytes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS7161

Azide-specific labeling of biomolecules by Staudinger-Bertozzi ligation phosphine derivatives of fluorescent probes suitable for single-molecule fluorescence spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS7161

Spt4/5 stimulates transcription elongation through the RNA polymerase clamp coiled-coil motif

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS7161

Addition of p-azido-L-phenylalanine to the genetic code of Escherichia coli

21 January 2018

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An enhanced system for unnatural amino acid mutagenesis in E. coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS7161

The structural basis for the oriented assembly of a TBP/TFB/promoter complex

21 January 2018

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UCSF Chimera--a visualization system for exploratory research and analysis

21 January 2018

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Fluorescence characteristics of 5-carboxytetramethylrhodamine linked covalently to the 5' end of oligonucleotides: multiple conformers of single-stranded and double-stranded dye-DNA complexes

21 January 2018

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Relative and absolute determination of fluorescence quantum yields of transparent samples

21 January 2018

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Structural basis for substrate loading in bacterial RNA polymerase

21 January 2018

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Features and development of Coot

21 January 2018

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PHENIX: a comprehensive Python-based system for macromolecular structure solution

21 January 2018

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Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS

21 January 2018

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12 December 2020

Protein-protein interactions in the archaeal transcriptional machinery: binding studies of isolated RNA polymerase subunits and transcription factors

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12 December 2020

The RPB7 orthologue E' is required for transcriptional activity of a reconstituted archaeal core enzyme at low temperatures and stimulates open complex formation

1 reference

12 December 2020

RNAP subunits F/E (RPB4/7) are stably associated with archaeal RNA polymerase: using fluorescence anisotropy to monitor RNAP assembly in vitro

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12 December 2020

The requirement for the basal transcription factor IIE is determined by the helical stability of promoter DNA.

1 reference

12 December 2020

DNA melting on yeast RNA polymerase II promoters

1 reference

12 December 2020

Opening of an RNA polymerase II promoter occurs in two distinct steps and requires the basal transcription factors IIE and IIH.

1 reference

12 December 2020

Identifiers

DOI

10.1038/NCOMMS7161

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25635909%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25635909%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

PubMed publication ID

25635909

1 reference