(Q54442568)

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Properties of RNA polymerase bypass mutants: implications for the role of ppGpp and its co-factor DksA in controlling transcription dependent on sigma54.

scientific article published on 24 April 2007

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29 December 2019

Properties of RNA polymerase bypass mutants: implications for the role of ppGpp and its co-factor DksA in controlling transcription dependent on sigma54 (English)

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29 December 2019

Victoria Shingler

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29 December 2019

Agnieszka Szalewska-Pałasz

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Agnieszka Szalewska-Palasz

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29 December 2019

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Linda U M Johansson

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29 December 2019

Lisandro M D Bernardo

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29 December 2019

Eleonore Skärfstad

4

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29 December 2019

Ewa Stec

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29 December 2019

Kristoffer Brännström

6

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29 December 2019

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24 April 2007

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29 December 2019

Journal of Biological Chemistry

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29 December 2019

282

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29 December 2019

25

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29 December 2019

18046-18056

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29 December 2019

Compilation and analysis of sigma(54)-dependent promoter sequences

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Mechanochemical ATPases and transcriptional activation.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Growth versus maintenance: a trade-off dictated by RNA polymerase availability and sigma factor competition?

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

The role of the alarmone (p)ppGpp in sigma N competition for core RNA polymerase.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Insights into transcriptional regulation and sigma competition from an equilibrium model of RNA polymerase binding to DNA

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

In vivo and in vitro effects of (p)ppGpp on the sigma(54) promoter Pu of the TOL plasmid of Pseudomonas putida.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Functional modulation of Escherichia coli RNA polymerase

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Integrated regulation in response to aromatic compounds: from signal sensing to attractive behaviour

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Integration of global regulation of two aromatic-responsive sigma(54)-dependent systems: a common phenotype by different mechanisms.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

The guanosine tetraphosphate (ppGpp) alarmone, DksA and promoter affinity for RNA polymerase in regulation of sigma-dependent transcription.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

DksA potentiates direct activation of amino acid promoters by ppGpp

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

The rpoB mutants destabilizing initiation complexes at stringently controlled promoters behave like "stringent" RNA polymerases in Escherichia coli

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Mechanism of regulation of transcription initiation by ppGpp. II. Models for positive control based on properties of RNAP mutants and competition for RNAP.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Mechanism of regulation of transcription initiation by ppGpp. I. Effects of ppGpp on transcription initiation in vivo and in vitro

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

rRNA promoter regulation by nonoptimal binding of sigma region 1.2: an additional recognition element for RNA polymerase.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Preparation of guanosine tetraphosphate (ppGpp) and guanosine pentaphosphate (pppGpp) from Escherichia coli ribosomes

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Reconstitution of RNA polymerase

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

An active role for a structured B-linker in effector control of the sigma54-dependent regulator DmpR.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

In vivo and in vitro effects of integration host factor at the DmpR-regulated sigma(54)-dependent Po promoter

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Procedure for the rapid, large-scale purification of Escherichia coli DNA-dependent RNA polymerase involving polymin P precipitation and DNA-cellulose chromatography

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Use of Mono Q high-resolution ion-exchange chromatography to obtain highly pure and active Escherichia coli RNA polymerase

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Bacterial RNA polymerase subunit and eukaryotic RNA polymerase subunit RPB6 are sequence, structural, and functional homologs and promote RNA polymerase assembly

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 A resolution

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Structural basis for transcription regulation by alarmone ppGpp.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Structural perspective on mutations affecting the function of multisubunit RNA polymerases

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Multiple mechanisms of transcription inhibition by ppGpp at the lambdap(R) promoter

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Regulation of sigma factor competition by the alarmone ppGpp

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Growth phase-dependent regulation of the extracytoplasmic stress factor, sigmaE, by guanosine 3',5'-bispyrophosphate (ppGpp).

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Identification and characterization of a new Escherichia coli gene that is a dosage-dependent suppressor of a dnaK deletion mutation

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

NTP-sensing by rRNA promoters in Escherichia coli is direct

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Defining a bacteriophage T4 late promoter: absence of a "-35" region

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Modulation of DNA repair by mutations flanking the DNA channel through RNA polymerase

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

RNA polymerase mutants that destabilize RNA polymerase-promoter complexes alter NTP-sensing by rrn P1 promoters

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Antibacterial peptide microcin J25 inhibits transcription by binding within and obstructing the RNA polymerase secondary channel

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M610181200

21 January 2018

Identifiers

10.1074/JBC.M610181200

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17456470%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

release_nw6q5xj4vvffrij4lsuzjrxwcu

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https://api.fatcat.wiki/v0/release/nw6q5xj4vvffrij4lsuzjrxwcu

24 November 2022

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PubMed publication ID

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17456470%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

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