(Q57835682)

Pathways to a protein folding intermediate observed in a 1-microsecond simulation in aqueous solution

21 January 2018

1 reference

Computer simulation of protein folding

21 January 2018

1 reference

Learning effective amino acid interactions through iterative stochastic techniques.

21 January 2018

1 reference

Interpreting the folding kinetics of helical proteins

21 January 2018

1 reference

Trefoil knotting revealed by molecular dynamics simulations of supercoiled DNA

21 January 2018

1 reference

Exploring global motions and correlations in the ribosome

21 January 2018

1 reference

Folding Trp-cage to NMR resolution native structure using a coarse-grained protein model

21 January 2018

1 reference

Molecular dynamics simulations of spontaneous fibril formation by random-coil peptides

21 January 2018

1 reference

Insertion and assembly of membrane proteins via simulation.

21 January 2018

1 reference

Molecular dynamics with the united-residue model of polypeptide chains. I. Lagrange equations of motion and tests of numerical stability in the microcanonical mode

21 January 2018

1 reference

Ab initio simulations of protein-folding pathways by molecular dynamics with the united-residue model of polypeptide chains

21 January 2018

1 reference

High-resolution protein folding with a transferable potential

21 January 2018

1 reference

Optimizing physical energy functions for protein folding.

21 January 2018

1 reference

Generating ensemble averages for small proteins from extended conformations by Monte Carlo simulations.

21 January 2018

1 reference

Dynamics of lennard-jones clusters: A characterization of the activation-relaxation technique

21 January 2018

1 reference

Exploring the energy landscape of proteins: A characterization of the activation-relaxation technique

21 January 2018

1 reference

Pathway complexity of Alzheimer's beta-amyloid Abeta16-22 peptide assembly

21 January 2018

1 reference

In Silico Assembly of Alzheimer's Aβ16-22Peptide into β-Sheets

21 January 2018

1 reference

Structures of soluble amyloid oligomers from computer simulations

21 January 2018

1 reference

Experimental evidence for the reorganization of beta-strands within aggregates of the Abeta(16-22) peptide.

21 January 2018

1 reference

The conformations of the amyloid-beta (21-30) fragment can be described by three families in solution

21 January 2018

1 reference

The Amber biomolecular simulation programs

21 January 2018

1 reference

Complex folding pathways in a simple beta-hairpin

21 January 2018

1 reference

A computer simulation method for the calculation of equilibrium constants for the formation of physical clusters of molecules: Application to small water clusters

21 January 2018

1 reference

Molecular dynamics with coupling to an external bath

21 January 2018

1 reference

Solvent viscosity dependence of the folding rate of a small protein: distributed computing study

21 January 2018

1 reference

Kinetics of the coil-to-helix transition on a rough energy landscape.

21 January 2018

1 reference

Evaluation of a fast implicit solvent model for molecular dynamics simulations

21 January 2018

1 reference

Design of a 20-amino acid, three-stranded beta-sheet protein

21 January 2018

1 reference

Three-dimensional solution structure of the B domain of staphylococcal protein A: comparisons of the solution and crystal structures

21 January 2018

1 reference

Two crystal structures of the B1 immunoglobulin-binding domain of streptococcal protein G and comparison with NMR

21 January 2018

1 reference

Characterization of the conformational space of a triple-stranded beta-sheet forming peptide with molecular dynamics simulations

21 January 2018

1 reference

Protein flexibility prediction by an all-atom mean-field statistical theory.

21 January 2018

1 reference

Atomic-level description of amyloid beta-dimer formation

21 January 2018

1 reference

Dissecting the assembly of Abeta16-22 amyloid peptides into antiparallel beta sheets.

21 January 2018

1 reference

Oligomerization of amyloid Abeta16-22 peptides using hydrogen bonds and hydrophobicity forces

21 January 2018

1 reference

Absence of reptation in the high-temperature folding of the trpzip2 beta-hairpin peptide

21 January 2018

1 reference

Solid state NMR reveals a pH-dependent antiparallel beta-sheet registry in fibrils formed by a beta-amyloid peptide

21 January 2018

1 reference

Aggregating the amyloid Abeta(11-25) peptide into a four-stranded beta-sheet structure.

21 January 2018

1 reference

MOLMOL: a program for display and analysis of macromolecular structures

21 January 2018

1 reference

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

21 January 2018

1 reference

Dependence of folding dynamics and structural stability on the location of a hydrophobic pair in β-hairpins

21 January 2018

1 reference