(Q64386654)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947447%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

title

Putative binding modes of Ku70-SAP domain with double strand DNA: a molecular modeling study (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947447%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

author name string

Shaowen Hu

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947447%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Janice M Pluth

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947447%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Francis A Cucinotta

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947447%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

language of work or name

English

0 references

publication date

27 September 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947447%20AND%20SRC:MED&resulttype=core&format=json

Journal of Molecular Modeling

13 February 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947447%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

volume

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947447%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

issue

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947447%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

page(s)

2163-2174

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947447%20AND%20SRC:MED&resulttype=core&format=json

Insights into protein-protein binding by binding free energy calculation and free energy decomposition for the Ras-Raf and Ras-RalGDS complexes.

13 February 2020

cites work

1 reference

12 December 2020

Information-driven protein-DNA docking using HADDOCK: it is a matter of flexibility

1 reference

12 December 2020

SAP - a putative DNA-binding motif involved in chromosomal organization

1 reference

12 December 2020

Electrostatics of nanosystems: application to microtubules and the ribosome

1 reference

12 December 2020

Comparison of multiple Amber force fields and development of improved protein backbone parameters

1 reference

12 December 2020

Hydration and solution structure of nucleic acids

1 reference

12 December 2020

Flexibility in the order of action and in the enzymology of the nuclease, polymerases, and ligase of vertebrate non-homologous DNA end joining: relevance to cancer, aging, and the immune system

1 reference

12 December 2020

Calculation of protein-ligand binding affinities.

1 reference

12 December 2020

The mechanism of human nonhomologous DNA end joining

1 reference

12 December 2020

A model for Ku heterodimer assembly and interaction with DNA. Implications for the function of Ku antigen

1 reference

12 December 2020

Biochemical kinetics model of DSB repair and induction of gamma-H2AX foci by non-homologous end joining

1 reference

12 December 2020

On the magnitude of the electrostatic contribution to ligand-DNA interactions

1 reference

12 December 2020

Structural model of full-length human Ku70-Ku80 heterodimer and its recognition of DNA and DNA-PKcs

1 reference

12 December 2020

Molecular dynamics and continuum solvent studies of the stability of polyG-polyC and polyA-polyT DNA duplexes in solution.

1 reference

12 December 2020

Electrostatic interactions in macromolecules: theory and applications

1 reference

12 December 2020

A molecular thermodynamic view of DNA-drug interactions: a case study of 25 minor-groove binders

1 reference

12 December 2020

Structure of the Ku heterodimer bound to DNA and its implications for double-strand break repair

1 reference

12 December 2020

Dynamics of DNA damage response proteins at DNA breaks: a focus on protein modifications

1 reference

12 December 2020

Fully flexible low-mode docking: application to induced fit in HIV integrase.

1 reference

12 December 2020

An overview of the structures of protein-DNA complexes

1 reference

12 December 2020

Heavy ion carcinogenesis and human space exploration.

1 reference

12 December 2020

A means to a DNA end: the many roles of Ku.

1 reference

12 December 2020

Intracellular redistribution of Ku immunoreactivity in response to cell-cell contact and growth modulating components in the medium.

1 reference

12 December 2020

Interaction of Ku protein and DNA-dependent protein kinase catalytic subunit with nucleic acids

1 reference

12 December 2020

Repair of ionizing radiation-induced DNA double-strand breaks by non-homologous end-joining

1 reference

12 December 2020

The three-dimensional structure of the C-terminal DNA-binding domain of human Ku70

1 reference

12 December 2020

The role of water in protein-DNA recognition

1 reference

12 December 2020

The endless tale of non-homologous end-joining

1 reference

12 December 2020

Exploring protein native states and large-scale conformational changes with a modified generalized born model

1 reference

12 December 2020

10.1007/S00894-011-1234-X

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947447%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

1 reference