(Q64903794)

30 June 2019

title

The LL-100 panel: 100 cell lines for blood cancer studies. (English)

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30 June 2019

10

Hans G Drexler

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30 June 2019

2

Claudia Pommerenke

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30 June 2019

Hilmar Quentmeier

1

Hilmar Quentmeier

1 reference

30 June 2019

Wilhelm Dirks

3

Wilhelm G Dirks

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30 June 2019

author name string

Sonja Eberth

4

1 reference

30 June 2019

Max Koeppel

5

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30 June 2019

Roderick A F MacLeod

6

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30 June 2019

Stefan Nagel

7

1 reference

30 June 2019

Klaus Steube

8

1 reference

30 June 2019

Cord C Uphoff

9

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30 June 2019

language of work or name

English

0 references

publication date

3 June 2019

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30 June 2019

published in

Scientific Reports

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30 June 2019

volume

9

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30 June 2019

issue

1

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30 June 2019

page(s)

8218

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30 June 2019

describes a project that uses

ggplot2

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pmc&rettype=xml&id=6547646

ggplot2

2 references

10 June 2022

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

limma

limma

2 references

22 June 2022

https://europepmc.org/article/PMC/6547646

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

DESeq2

DESeq2

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

affy

affy

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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Systematic variation in gene expression patterns in human cancer cell lines

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Assessment of tumor characteristic gene expression in cell lines using a tissue similarity index (TSI).

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Comparison of RNA-Seq and microarray in transcriptome profiling of activated T cells

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Understanding pathogenetic aspects and clinical presentation of primary effusion lymphoma through its derived cell lines

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Expression of B-cell markers in classical hodgkin lymphoma: a tissue microarray analysis of 330 cases

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Kaposi's sarcoma-associated herpesvirus-infected primary effusion lymphoma has a plasma cell gene expression profile

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Immunophenotypic analysis of the Kaposi sarcoma herpesvirus (KSHV; HHV-8)-infected B cells in HIV+ multicentric Castleman disease (MCD)

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Transcriptional repression by blimp-1 (PRDI-BF1) involves recruitment of histone deacetylase

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Blimp-1/PRDM1 regulates the transcription of human CS1 (SLAMF7) gene in NK and B cells

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7 January 2021

Blimp-1-Dependent IL-10 Production by Tr1 Cells Regulates TNF-Mediated Tissue Pathology.

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Monoclonal antibody therapy in multiple myeloma.

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Primary effusion lymphoma

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Transcriptional Addiction in Cancer.

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Transcription factors and translocations in lymphoid and myeloid leukemia

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The pan-cancer pathological regulatory landscape

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Transcription factor activities enhance markers of drug sensitivity in cancer.

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7 January 2021

Benchmark and integration of resources for the estimation of human transcription factor activities

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7 January 2021

Transcriptional networks in developing and mature B cells

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7 January 2021

GATA-related hematologic disorders

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7 January 2021

Role of transcription factors C/EBPalpha and PU.1 in normal hematopoiesis and leukemia.

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7 January 2021

TAL1 as a master oncogenic transcription factor in T-cell acute lymphoblastic leukemia

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7 January 2021

Insights into the Pathogenesis of Anaplastic Large-Cell Lymphoma through Genome-wide DNA Methylation Profiling

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7 January 2021

Overexpression of LEF1 predicts unfavorable outcome in adult patients with B-precursor acute lymphoblastic leukemia.

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7 January 2021

Inactivation of LEF1 in T-cell acute lymphoblastic leukemia

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7 January 2021

Aberrant lymphocyte enhancer-binding factor 1 expression is characteristic for sporadic Burkitt's lymphoma

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7 January 2021

Expression of LEF1 in mantle cell lymphoma.

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7 January 2021

Identification of LMO2 transcriptome and interactome in diffuse large B-cell lymphoma

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7 January 2021

Deregulated homeobox gene expression in cancer: cause or consequence?

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Classification and nomenclature of all human homeobox genes.

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NKL homeobox gene activities in hematopoietic stem cells, T-cell development and T-cell leukemia

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7 January 2021

NKL homeobox gene activities in B-cell development and lymphomas

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7 January 2021

NKL homeobox gene MSX1 acts like a tumor suppressor in NK-cell leukemia

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TCRα rearrangements identify a subgroup of NKL-deregulated adult T-ALLs associated with favorable outcome.

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Gene expression signatures define novel oncogenic pathways in T cell acute lymphoblastic leukemia

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Repressed BMP signaling reactivates NKL homeobox gene MSX1 in a T-ALL subset

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Integrated transcript and genome analyses reveal NKX2-1 and MEF2C as potential oncogenes in T cell acute lymphoblastic leukemia.

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7 January 2021

Germinal centres and B cell lymphomagenesis

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7 January 2021

The biology of human lymphoid malignancies revealed by gene expression profiling.

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Molecular subtypes of diffuse large B-cell lymphoma arise by distinct genetic pathways

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7 January 2021

Genetic and Functional Drivers of Diffuse Large B Cell Lymphoma

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7 January 2021

Molecular subtypes of diffuse large B cell lymphoma are associated with distinct pathogenic mechanisms and outcomes

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7 January 2021

Integrating genomic alterations in diffuse large B-cell lymphoma identifies new relevant pathways and potential therapeutic targets.

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7 January 2021

A census of human cancer genes

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7 January 2021

Computational Identification of Tissue-Specific Splicing Regulatory Elements in Human Genes from RNA-Seq Data

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7 January 2021

Alternative isoform regulation in human tissue transcriptomes

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7 January 2021

Mechanisms of alternative splicing regulation: insights from molecular and genomics approaches

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7 January 2021

STAR: ultrafast universal RNA-seq aligner

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7 January 2021

The Sequence Alignment/Map format and SAMtools

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7 January 2021

HTSeq--a Python framework to work with high-throughput sequencing data

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7 January 2021

Differential expression analysis for sequence count data

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7 January 2021

Enhanced whole exome sequencing by higher DNA insert lengths.

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7 January 2021

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

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7 January 2021

VarScan 2: somatic mutation and copy number alteration discovery in cancer by exome sequencing

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7 January 2021

Deriving the consequences of genomic variants with the Ensembl API and SNP Effect Predictor

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7 January 2021

Control-FREEC: a tool for assessing copy number and allelic content using next-generation sequencing data

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7 January 2021

Circos: an information aesthetic for comparative genomics

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7 January 2021

limma powers differential expression analyses for RNA-sequencing and microarray studies

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7 January 2021

affy--analysis of Affymetrix GeneChip data at the probe level

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7 January 2021

Functional characterization of somatic mutations in cancer using network-based inference of protein activity

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7 January 2021

SET-NUP214 fusion in acute myeloid leukemia- and T-cell acute lymphoblastic leukemia-derived cell lines

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7 January 2021

The transcription factor TTF-1 is expressed at the onset of thyroid and lung morphogenesis and in restricted regions of the foetal brain

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12 December 2020

Involvement of interleukin-10 (IL-10) and viral IL-6 in the spontaneous growth of Kaposi's sarcoma herpesvirus-associated infected primary effusion lymphoma cells

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Chemosensitivity profile of cancer cell lines and identification of genes determining chemosensitivity by an integrated bioinformatical approach using cDNA arrays

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12 December 2020

Detection and visualization of differential splicing in RNA-Seq data with JunctionSeq

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12 December 2020

10.1038/S41598-019-44491-X

Identifiers

DOI

1 reference

30 June 2019

PMC publication ID

6547646

1 reference

30 June 2019

PubMed publication ID

31160637

1 reference

30 June 2019