(Q78679290)

English

Evidence of turn and salt bridge contributions to beta-hairpin stability: MD simulations of C-terminal fragment from the B1 domain of protein G

scientific article published on 01 December 2002

In more languages

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12488000%20AND%20SRC:MED&resulttype=core&format=json

15 December 2019

Evidence of turn and salt bridge contributions to beta-hairpin stability: MD simulations of C-terminal fragment from the B1 domain of protein G (English)

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12488000%20AND%20SRC:MED&resulttype=core&format=json

15 December 2019

2

object named as

Michael Levitt

1 reference

Europe PubMed Central

PubMed publication ID

15 December 2019

author name string

Jerry Tsai

1

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12488000%20AND%20SRC:MED&resulttype=core&format=json

15 December 2019

publication date

1 December 2002

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12488000%20AND%20SRC:MED&resulttype=core&format=json

15 December 2019

Biophysical Chemistry

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12488000%20AND%20SRC:MED&resulttype=core&format=json

15 December 2019

101-102

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12488000%20AND%20SRC:MED&resulttype=core&format=json

15 December 2019

187-201

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12488000%20AND%20SRC:MED&resulttype=core&format=json

15 December 2019

The structure of proteins; two hydrogen-bonded helical configurations of the polypeptide chain

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Configurations of Polypeptide Chains With Favored Orientations Around Single Bonds: Two New Pleated Sheets

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Temperature, stability, and the hydrophobic interaction

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

The enthalpy of transfer of unfolded proteins into solutions of urea and guanidinium chloride.

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Low-temperature unfolding of a mutant of phage T4 lysozyme. 1. Equilibrium studies.

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

The thermodynamic stability of proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Thermodynamic stability and point mutations of bacteriophage T4 lysozyme

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Helix propensities of the amino acids measured in alanine-based peptides without helix-stabilizing side-chain interactions.

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

N- and C-capping preferences for all 20 amino acids in alpha-helical peptides

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Dissecting the stability of a beta-hairpin peptide that folds in water: NMR and molecular dynamics analysis of the beta-turn and beta-strand contributions to folding

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Thermodynamics of a beta-hairpin structure: evidence for cooperative formation of folding nucleus

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Role of side-chains in the cooperative beta-hairpin folding of the short C-terminal fragment derived from streptococcal protein G

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Design of a 20-amino acid, three-stranded beta-sheet protein

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Folding dynamics and mechanism of beta-hairpin formation

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Beta-hairpin and beta-sheet formation in designed linear peptides.

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

A short linear peptide that folds into a native stable beta-hairpin in aqueous solution

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Fragment reconstitution of a small protein: disulfide mutant of a short C-terminal fragment derived from streptococcal protein G

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Refolding simulations of an isolated fragment of barnase into a native-like beta hairpin: evidence for compactness and hydrogen bonding as concurrent stabilizing factors

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Unfolding simulations of the 85-102 beta-hairpin of barnase

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Stability of a model beta-sheet in water

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

A molecular dynamics simulation study of segment B1 of protein G.

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Free energy determinants of secondary structure formation: II. Antiparallel beta-sheets

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Molecular dynamics simulation of the unfolding of barnase: characterization of the major intermediate

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Exploring the energy landscape of a beta hairpin in explicit solvent

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

The free energy landscape for beta hairpin folding in explicit water

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Dynamics and thermodynamics of beta-hairpin assembly: insights from various simulation techniques

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

A molecular dynamics study of the 41-56 beta-hairpin from B1 domain of protein G

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Molecular dynamics simulations of unfolding and refolding of a beta-hairpin fragment of protein G

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Understanding beta-hairpin formation

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Molecular dynamics simulations of a beta-hairpin fragment of protein G: balance between side-chain and backbone forces

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Beta-hairpin folding simulations in atomistic detail using an implicit solvent model

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Understanding beta-hairpin formation by molecular dynamics simulations of unfolding

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Calculations on folding of segment B1 of streptococcal protein G

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Funnels, pathways, and the energy landscape of protein folding: a synthesis

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Critical role of beta-hairpin formation in protein G folding.

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Structural and dynamic characterization of the urea denatured state of the immunoglobulin binding domain of streptococcal protein G by multidimensional heteronuclear NMR spectroscopy.

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Important role of hydrogen bonds in the structurally polarized transition state for folding of the src SH3 domain

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Quantification of the hydrophobic interaction by simulations of the aggregation of small hydrophobic solutes in water

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

beta-hairpin stability and folding: molecular dynamics studies of the first beta-hairpin of tendamistat

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Molecular dynamics of native protein. I. Computer simulation of trajectories

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Two crystal structures of the B1 immunoglobulin-binding domain of streptococcal protein G and comparison with NMR

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

A discussion of the solution for the best rotation to relate two sets of vectors

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

The volume of atoms on the protein surface: calculated from simulation, using Voronoi polyhedra

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2802%2900198-9

7 January 2021

based on heuristic

inferred from DOI database lookup

Identifiers

10.1016/S0301-4622(02)00198-9

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12488000%20AND%20SRC:MED&resulttype=core&format=json

15 December 2019

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12488000%20AND%20SRC:MED&resulttype=core&format=json

15 December 2019

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q78679290&oldid=2047226172"