(Q79322491)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14636572%20AND%20SRC:MED&resulttype=core&format=json

21 December 2019

title

The flap domain is required for pause RNA hairpin inhibition of catalysis by RNA polymerase and can modulate intrinsic termination (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14636572%20AND%20SRC:MED&resulttype=core&format=json

21 December 2019

2

Robert Landick

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14636572%20AND%20SRC:MED&resulttype=core&format=json

21 December 2019

author name string

Innokenti Toulokhonov

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14636572%20AND%20SRC:MED&resulttype=core&format=json

21 December 2019

publication date

1 November 2003

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21 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14636572%20AND%20SRC:MED&resulttype=core&format=json

21 December 2019

volume

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14636572%20AND%20SRC:MED&resulttype=core&format=json

21 December 2019

issue

5

1 reference

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21 December 2019

page(s)

1125-1136

1 reference

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Interaction of a nascent RNA structure with RNA polymerase is required for hairpin-dependent transcriptional pausing but not for transcript release

21 December 2019

cites work

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Pausing by bacterial RNA polymerase is mediated by mechanistically distinct classes of signals

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Co-overexpression of Escherichia coli RNA polymerase subunits allows isolation and analysis of mutant enzymes lacking lineage-specific sequence insertions

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Dissection of the his leader pause site by base substitution reveals a multipartite signal that includes a pause RNA hairpin

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Effects of neutral salts on RNA chain elongation and pausing by Escherichia coli RNA polymerase

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Multiple interactions stabilize a single paused transcription intermediate in which hairpin to 3' end spacing distinguishes pause and termination pathways.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Conformational flexibility of bacterial RNA polymerase.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

The many conformational states of RNA polymerase elongation complexes and their roles in the regulation of transcription

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

The mechanism of intrinsic transcription termination.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Control of intrinsic transcription termination by N and NusA: the basic mechanisms

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Shortening of RNA:DNA hybrid in the elongation complex of RNA polymerase is a prerequisite for transcription termination

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Mechanistic model of the elongation complex of Escherichia coli RNA polymerase

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

A structural model of transcription elongation

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

A role for interaction of the RNA polymerase flap domain with the sigma subunit in promoter recognition.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

RNA polymerase clamps down

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Quantitative analysis of transcriptional pausing by Escherichia coli RNA polymerase: his leader pause site as paradigm

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Determination of intrinsic transcription termination efficiency by RNA polymerase elongation rate

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Information processing by RNA polymerase: recognition of regulatory signals during RNA chain elongation

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Modular organization of the catalytic center of RNA polymerase

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Ubiquitous transcriptional pausing is independent of RNA polymerase backtracking.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

The RNA-DNA hybrid maintains the register of transcription by preventing backtracking of RNA polymerase.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Roles of RNA:DNA hybrid stability, RNA structure, and active site conformation in pausing by human RNA polymerase II.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Folding of a large ribozyme during transcription and the effect of the elongation factor NusA.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Parameters affecting transcription termination by Escherichia coli RNA. II. Construction and analysis of hybrid terminators

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

RNA polymerase mutations that impair conversion to a termination-resistant complex by Q antiterminator proteins

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Unified two-metal mechanism of RNA synthesis and degradation by RNA polymerase

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Thermodynamic parameters to predict stability of RNA/DNA hybrid duplexes

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Terminator-distal sequences determine the in vitro efficiency of the early terminators of bacteriophages T3 and T7.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Allosteric control of RNA polymerase by a site that contacts nascent RNA hairpins

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

The elongation-termination decision in transcription

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Discontinuous movements of DNA and RNA in RNA polymerase accompany formation of a paused transcription complex.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Preferential interaction of the his pause RNA hairpin with RNA polymerase beta subunit residues 904-950 correlates with strong transcriptional pausing

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Mechanism of intrinsic transcription termination and antitermination

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution.

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

Mfold web server for nucleic acid folding and hybridization prediction

1 reference

https://api.crossref.org/works/10.1016%2FS1097-2765%2803%2900439-8

7 January 2021

10.1016/S1097-2765(03)00439-8

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14636572%20AND%20SRC:MED&resulttype=core&format=json

21 December 2019

1 reference