(Q80844889)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18330485%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

title

Extensive rearrangements in the chloroplast genome of Trachelium caeruleum are associated with repeats and tRNA genes (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18330485%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

Trachelium caeruleum

1 reference

Rosemarie C Haberle

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18330485%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

H Matthew Fourcade

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18330485%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

Jeffrey L Boore

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18330485%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

Robert K Jansen

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18330485%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

publication date

11 March 2008

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18330485%20AND%20SRC:MED&resulttype=core&format=json

Journal of Molecular Evolution

3 January 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18330485%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

volume

66

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18330485%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

page(s)

350-361

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18330485%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

issue

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18330485%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1007/s00239-008-9086-4

3 January 2020

exact match

0 references

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12 December 2020

DNA repeats lead to the accelerated loss of gene order in bacteria

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12 December 2020

Complete Nucleotide Sequence of the Chloroplast Genome from the Tasmanian Blue Gum, Eucalyptus globulus (Myrtaceae)

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12 December 2020

Chloroplast DNA evidence on the ancient evolutionary split in vascular land plants.

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12 December 2020

Consed: a graphical tool for sequence finishing

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12 December 2020

Widespread occurrence of small inversions in the chloroplast genomes of land plants.

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12 December 2020

The Chloroplast Genome of Phalaenopsis aphrodite (Orchidaceae): Comparative Analysis of Evolutionary Rate with that of Grasses and Its Phylogenetic Implications

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12 December 2020

The highly rearranged chloroplast genome of Trachelium caeruleum (Campanulaceae): multiple inversions, inverted repeat expansion and contraction, transposition, insertions/deletions, and several repeat families

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12 December 2020

Comparative chloroplast genomics: analyses including new sequences from the angiosperms Nuphar advena and Ranunculus macranthus

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12 December 2020

Automatic annotation of organellar genomes with DOGMA

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12 December 2020

MultiPipMaker and supporting tools: Alignments and analysis of multiple genomic DNA sequences

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12 December 2020

The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals

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12 December 2020

Associations between inverted repeats and the structural evolution of bacterial genomes

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12 December 2020

Two chloroplast DNA inversions originated simultaneously during the early evolution of the sunflower family (Asteraceae).

1 reference

12 December 2020

Hairpins create minute inversions in non-coding regions of chloroplast DNA.

1 reference

12 December 2020

Many Parallel Losses of infA from Chloroplast DNA during Angiosperm Evolution with Multiple Independent Transfers to the Nucleus

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12 December 2020

Base-calling of automated sequencer traces using phred. II. Error probabilities

1 reference

12 December 2020

Evolution of the trnF(GAA) gene in Arabidopsis relatives and the brassicaceae family: monophyletic origin and subsequent diversification of a plastidic pseudogene.

1 reference

12 December 2020

A mutation hotspot in the chloroplast genome of a conifer (Douglas-fir: Pseudotsuga) is caused by variability in the number of direct repeats derived from a partially duplicated tRNA gene.

1 reference

12 December 2020

Changes in the structure of DNA molecules and the amount of DNA per plastid during chloroplast development in maize

1 reference

12 December 2020

Gene Relocations within Chloroplast Genomes of Jasminum and Menodora (Oleaceae) Are Due to Multiple, Overlapping Inversions

1 reference

12 December 2020

Organization and sequence of five tRNA genes and of an unidentified reading frame in the wheat chloroplast genome: evidence for gene rearrangements during the evolution of chloroplast genomes

1 reference

12 December 2020

Expression of the rpl23, rpl2 and rps19 genes in spinach chloroplasts

1 reference

12 December 2020

Intramolecular recombination of chloroplast genome mediated by short direct-repeat sequences in wheat species

1 reference

12 December 2020

The endpoints of an inversion in wheat chloroplast DNA are associated with short repeated sequences containing homology to att-lambda

1 reference

12 December 2020

The Chloroplast Genome Sequence of the Green Alga Pseudendoclonium akinetum (Ulvophyceae) Reveals Unusual Structural Features and New Insights into the Branching Order of Chlorophyte Lineages

1 reference

12 December 2020

In wheat ctDNA, segments of ribosomal protein genes are dispersed repeats, probably conserved by nonreciprocal recombination

1 reference

12 December 2020

Methods for obtaining and analyzing whole chloroplast genome sequences.

1 reference

12 December 2020

The complete chloroplast DNA sequence of the green alga Oltmannsiellopsis viridis reveals a distinctive quadripartite architecture in the chloroplast genome of early diverging ulvophytes

1 reference

12 December 2020

Complete sequence of the maize chloroplast genome: gene content, hotspots of divergence and fine tuning of genetic information by transcript editing

1 reference

12 December 2020

Chloroplast DNA rearrangements in Campanulaceae: phylogenetic utility of highly rearranged genomes

1 reference

12 December 2020

A comparative analysis of the Lactuca and Helianthus (Asteraceae) plastid genomes: identification of divergent regions and categorization of shared repeats

1 reference

12 December 2020

Function and evolution of a minimal plastid genome from a nonphotosynthetic parasitic plant

1 reference

12 December 2020

Unusual structure of geranium chloroplast DNA: A triple-sized inverted repeat, extensive gene duplications, multiple inversions, and two repeat families

1 reference

12 December 2020

Dispersed repetitive sequences in the chloroplast genome of Douglas-fir

1 reference

12 December 2020

Dispersed repeats and structural reorganization in subclover chloroplast DNA

1 reference

12 December 2020

Complete nucleotide sequence of the Oenothera elata plastid chromosome, representing plastome I of the five distinguishable euoenothera plastomes

1 reference

12 December 2020

Loss of all ndh genes as determined by sequencing the entire chloroplast genome of the black pine Pinus thunbergii

1 reference

12 December 2020

A chloroplast DNA mutational hotspot and gene conversion in a noncoding region near rbcL in the grass family (Poaceae).

1 reference

12 December 2020

Structural rearrangements, including parallel inversions, within the chloroplast genome of Anemone and related genera

1 reference

12 December 2020

Chloroplast microsatellites: new tools for studies in plant ecology and evolution.

1 reference

12 December 2020

RNA editing sites in tobacco chloroplast transcripts: editing as a possible regulator of chloroplast RNA polymerase activity.

1 reference

12 December 2020

Rapid evolution of RNA editing sites in a small non-essential plastid gene

1 reference

12 December 2020

Two copies of a DNA element, 'Wendy', in the chloroplast chromosome of Chlamydomonas reinhardtii between rearranged gene clusters

1 reference

12 December 2020

Chloroplast DNA from higher plants replicates by both the Cairns and the rolling circle mechanism

1 reference

12 December 2020

The site of deletion of the inverted repeat in pea chloroplast DNA contains duplicated gene fragments

1 reference

12 December 2020

The Complete Chloroplast Genome Sequence of Pelargonium x hortorum: Organization and Evolution of the Largest and Most Highly Rearranged Chloroplast Genome of Land Plants

1 reference

12 December 2020

Phylogenetic affinities of the grasses to other monocots as revealed by molecular analysis of chloroplast DNA.

1 reference

12 December 2020

Complete chloroplast genome sequence of Gycine max and comparative analyses with other legume genomes

1 reference

12 December 2020

Structural rearrangements of the chloroplast genome provide an important phylogenetic link in ferns

1 reference

12 December 2020

Uridine insertion/deletion RNA editing in trypanosome mitochondria: a complex business

1 reference

12 December 2020

The chloroplast chromosomes in land plants

1 reference

12 December 2020

REPuter: the manifold applications of repeat analysis on a genomic scale

1 reference

12 December 2020

Sequence-repeat polymorphisms exhibit the signature of recombination in lodgepole pine chloroplast DNA

1 reference

12 December 2020

The chloroplast and mitochondrial genome sequences of the charophyte Chaetosphaeridium globosum: insights into the timing of the events that restructured organelle DNAs within the green algal lineage that led to land plants

1 reference

12 December 2020

Structural features of a wheat plastome as revealed by complete sequencing of chloroplast DNA.

1 reference

12 December 2020

The plastid chromosome of spinach (Spinacia oleracea): complete nucleotide sequence and gene organization

1 reference

12 December 2020

The Chlamydomonas reinhardtii plastid chromosome: islands of genes in a sea of repeats

1 reference

12 December 2020

Pseudogenes and short repeated sequences in the rice chloroplast genome

1 reference

12 December 2020