(Q91218352)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31708947%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

title

Taxonomically Informed Scoring Enhances Confidence in Natural Products Annotation (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31708947%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

1 reference

chemotaxonomy

1 reference

natural products

1 reference

metabolite annotation

computational metabolomics

specialized metabolome

1 reference

scoring system

1 reference

taxonomic distance

Glaucium grandiflorum

1 reference

Glaucium grandiflorum

1 reference

inferred from

reverse claim

Glaucium corniculatum

1 reference

inferred from

reverse claim

Glaucium grandiflorum

1 reference

1

Adriano Rutz

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31708947%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

10

Pierre-Marie Allard

1 reference

20 April 2020

9

Jean-Luc Wolfender

1 reference

20 April 2020

4

Jonathan Bisson

1 reference

20 April 2020

7

Samad Nejad Ebrahimi

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31708947%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

3

Simon Ollivier

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31708947%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

2

Miwa Dounoue-Kubo

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31708947%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

6

Tongchai Saesong

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31708947%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

5

Mohsen Bagheri

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31708947%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

8

Kornkanok Ingkaninan

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31708947%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

0 references

0 references

0 references

25 October 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31708947%20AND%20SRC:MED&resulttype=core&format=json

full work available at URL

20 April 2020

number of pages

15

0 references

https://www.frontiersin.org/articles/10.3389/fpls.2019.01329/pdf

1 reference

19 March 2024

https://api.unpaywall.org/v2/10.3389/fpls.2019.01329?email=unpaywall_01@example.com

published in

Frontiers in Plant Science

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31708947%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

volume

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31708947%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

page(s)

1329

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31708947%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

20 April 2020

copyright license

0 references

copyright status

copyrighted

0 references

describes a project that uses

Jupyter notebook file

1 reference

Cytoscape

2 references

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

based on heuristic

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

0 references

0 references

0 references

0 references

Dictionary of Natural Products

0 references

Global Names Architecture

0 references

GNPS

0 references

RDKit

software version identifier

2019.03.1

0 references

GitHub

0 references

Open Science Framework

0 references

Bayesian optimization

0 references

liquid chromatography–mass spectrometry

0 references

0 references

0 references

0 references

0 references

tandem mass spectrometry

0 references

2 references

18 March 2024

https://api.unpaywall.org/v2/10.3389/fpls.2019.01329?email=unpaywall_01@example.com

19 March 2024

https://api.unpaywall.org/v2/10.3389/fpls.2019.01329?email=unpaywall_01@example.com

access restriction status

open access

1 reference

based on heuristic

inferred from online access status

funder

National Institutes of Health

0 references

Swiss National Science Foundation

0 references

Yamada Science Foundation

0 references

cites work

India needs more plant taxonomists

0 references

Deep metabolome annotation in natural products research: towards a virtuous cycle in metabolite identification

0 references

Integration of Molecular Networking and In-Silico MS/MS Fragmentation for Natural Products Dereplication.

0 references

Competitive fragmentation modeling of ESI-MS/MS spectra for putative metabolite identification

0 references

CFM-ID: a web server for annotation, spectrum prediction and metabolite identification from tandem mass spectra

0 references

Liquid-chromatography retention order prediction for metabolite identification

0 references

How to Compute Electron Ionization Mass Spectra from First Principles

0 references

SIRIUS: decomposing isotope patterns for metabolite identification

0 references

An integrative omics perspective for the analysis of chemical signals in ecological interactions

0 references

A cross-platform toolkit for mass spectrometry and proteomics

0 references

A taxonomic distinctness index and its statistical properties

0 references

Propagating annotations of molecular networks using in silico fragmentation.

0 references

CFM-ID 3.0: Significantly Improved ESI-MS/MS Prediction and Compound Identification.

0 references

SIRIUS 4: a rapid tool for turning tandem mass spectra into metabolite structure information

0 references

Assessing Specialized Metabolite Diversity in the Cosmopolitan Plant Genus Euphorbia L

0 references

Dereplication: racing to speed up the natural products discovery process.

0 references

Method transfer for fast liquid chromatography in pharmaceutical analysis: application to short columns packed with small particle. Part II: gradient experiments

0 references

Correlating chemical diversity with taxonomic distance for discovery of natural products in myxobacteria.

0 references

A biosynthetically informed distance measure to compare secondary metabolite profiles.

0 references

Comprehensive mass spectrometry-guided phenotyping of plant specialized metabolites reveals metabolic diversity in the cosmopolitan plant family Rhamnaceae

0 references

Seven Golden Rules for heuristic filtering of molecular formulas obtained by accurate mass spectrometry

0 references

Identification of small molecules using accurate mass MS/MS search

0 references

Are We Losing the Science of Taxonomy?

0 references

Aporphine Alkaloids. II

0 references

Synthesis of (±)-Glaucine and (±)-Neospirodienonevia an One-PotBischler—Napieralski Reaction and Oxidative Coupling by a Hypervalent Iodine Reagent

0 references

Novel Approach to Classify Plants Based on Metabolite-Content Similarity

0 references

Convergent evolution in plant specialized metabolism

0 references

MZmine 2: modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data

0 references

MetFrag relaunched: incorporating strategies beyond in silico fragmentation

0 references

Cytoscape: a software environment for integrated models of biomolecular interaction networks

0 references

A New Golden Age of Natural Products Drug Discovery

0 references

Hydrogen Rearrangement Rules: Computational MS/MS Fragmentation and Structure Elucidation Using MS-FINDER Software

0 references

A cheminformatics approach to characterize metabolomes in stable-isotope-labeled organisms

0 references

Spectral library generating function for assessing spectrum-spectrum match significance

0 references

Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking

0 references

Diversity measurement combining relative abundances and taxonomic distinctiveness of species

0 references

Accelerating Metabolite Identification in Natural Product Research: Toward an Ideal Combination of Liquid Chromatography–High-Resolution Tandem Mass Spectrometry and NMR Profiling, in Silico Databases, and Chemometrics

0 references

Dimeric Aporphine-Benzylisoquinoline and Aporphine-Pavine Alkaloids.

1 reference

COCI

https://opencitations.net/index/api/v1/references/10.3389/FPLS.2019.01329

1 December 2023

Identifiers

DOI

10.3389/FPLS.2019.01329

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31708947%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

20 April 2020

0 references

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31708947%20AND%20SRC:MED&resulttype=core&format=json

20 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31708947%20AND%20SRC:MED&resulttype=core&format=json