(Q91345425)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31745340%20AND%20SRC:MED&resulttype=core&format=json

21 April 2020

title

TCR sequencing paired with massively parallel 3' RNA-seq reveals clonotypic T cell signatures (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31745340%20AND%20SRC:MED&resulttype=core&format=json

21 April 2020

1 reference

single cell transcriptomics

1 reference

A curated database reveals trends in single-cell transcriptomics

7 February 2021

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31745340%20AND%20SRC:MED&resulttype=core&format=json

21 April 2020

Duncan M Morgan

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31745340%20AND%20SRC:MED&resulttype=core&format=json

21 April 2020

Bert Ruiter

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31745340%20AND%20SRC:MED&resulttype=core&format=json

21 April 2020

Alex K. Shalek

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31745340%20AND%20SRC:MED&resulttype=core&format=json

21 April 2020

J Christopher Love

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31745340%20AND%20SRC:MED&resulttype=core&format=json

21 April 2020

author name string

Todd M Gierahn

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31745340%20AND%20SRC:MED&resulttype=core&format=json

21 April 2020

Brinda Monian

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31745340%20AND%20SRC:MED&resulttype=core&format=json

21 April 2020

Naveen K Mehta

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31745340%20AND%20SRC:MED&resulttype=core&format=json

21 April 2020

Wayne G Shreffler

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31745340%20AND%20SRC:MED&resulttype=core&format=json

21 April 2020

publication date

19 November 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31745340%20AND%20SRC:MED&resulttype=core&format=json

external data available at URL

21 April 2020

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE136028

1 reference

A curated database reveals trends in single-cell transcriptomics

7 February 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31745340%20AND%20SRC:MED&resulttype=core&format=json

21 April 2020

volume

20

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31745340%20AND%20SRC:MED&resulttype=core&format=json

21 April 2020

issue

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31745340%20AND%20SRC:MED&resulttype=core&format=json

21 April 2020

page(s)

1692-1699

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31745340%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

21 April 2020

blood

1 reference

A curated database reveals trends in single-cell transcriptomics

7 February 2021

spleen

1 reference

A curated database reveals trends in single-cell transcriptomics

7 February 2021

seq-well

1 reference

A curated database reveals trends in single-cell transcriptomics

T cell receptor repertoire usage in cancer as a surrogate marker for immune responses

7 February 2021

cites work

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

High-throughput sequencing of TCR repertoires in multiple sclerosis reveals intrathecal enrichment of EBV-reactive CD8+ T cells

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

TCR sequencing facilitates diagnosis and identifies mature T cells as the cell of origin in CTCL

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Using synthetic templates to design an unbiased multiplex PCR assay.

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Complimentary mechanisms of dual checkpoint blockade expand unique T-cell repertoires and activate adaptive anti-tumor immunity in triple-negative breast tumors.

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Antigen presentation profiling reveals recognition of lymphoma immunoglobulin neoantigens.

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Pathogen Cell-to-Cell Variability Drives Heterogeneity in Host Immune Responses

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Single-cell RNA sequencing to explore immune cell heterogeneity

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Lineage tracking reveals dynamic relationships of T cells in colorectal cancer

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Linking T-cell receptor sequence to functional phenotype at the single-cell level

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

T cell fate and clonality inference from single-cell transcriptomes

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Paired analysis of TCRα and TCRβ chains at the single-cell level in mice

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Droplet barcoding for single-cell transcriptomics applied to embryonic stem cells.

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Seq-Well: portable, low-cost RNA sequencing of single cells at high throughput

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Simultaneous multiplexed amplicon sequencing and transcriptome profiling in single cells

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

High-throughput targeted long-read single cell sequencing reveals the clonal and transcriptional landscape of lymphocytes

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Single-cell gene expression reveals a landscape of regulatory T cell phenotypes shaped by the TCR.

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Nanopore sequencing and assembly of a human genome with ultra-long reads.

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Single-cell isoform RNA sequencing characterizes isoforms in thousands of cerebellar cells

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Highly Efficient, Massively-Parallel Single-Cell RNA-Seq Reveals Cellular States and Molecular Features of Human Skin Pathology

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

T-cell-specific deletion of T-cell receptor transgenes allows functional rearrangement of endogenous α- and β-genes

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Quantifiable predictive features define epitope-specific T cell receptor repertoires

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Comprehensive Phenotyping of T Cells Using Flow Cytometry

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Human memory T cells: generation, compartmentalization and homeostasis

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

A Distinct Gene Module for Dysfunction Uncoupled from Activation in Tumor-Infiltrating T Cells

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

The signaling symphony: T cell receptor tunes cytokine-mediated T cell differentiation

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Expression of two T cell receptor alpha chains: dual receptor T cells

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Flow-cytometric analysis of rare antigen-specific T cells

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Live-cell assay to detect antigen-specific CD4+ T-cell responses by CD154 expression

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Food allergy diagnosis and therapy: where are we now?

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Transcriptional Profiling of Th2 Cells Identifies Pathogenic Features Associated with Asthma

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Memory T cell subsets, migration patterns, and tissue residence

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

CD4+ T cell effector commitment coupled to self-renewal by asymmetric cell divisions.

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Global mapping of H3K4me3 and H3K27me3 reveals specificity and plasticity in lineage fate determination of differentiating CD4+ T cells

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Transcriptional regulation in the immune system: all roads lead to AP-1.

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Lack of IL-4 receptor expression on T helper cells reduces T helper 2 cell polyfunctionality and confers resistance in allergic bronchopulmonary mycosis

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Hierarchical IL-5 expression defines a subpopulation of highly differentiated human Th2 cells.

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

High-resolution repertoire analysis reveals a major bystander activation of Tfh and Tfr cells

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Nature, nurture, or chance: stochastic gene expression and its consequences

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Polyfunctional responses by human T cells result from sequential release of cytokines

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Cell Hashing with barcoded antibodies enables multiplexing and doublet detection for single cell genomics

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Mapping the life histories of T cells.

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Overview of methodologies for T-cell receptor repertoire analysis

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

CD45: a critical regulator of signaling thresholds in immune cells

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Cost-effective, high-throughput DNA sequencing libraries for multiplexed target capture

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Reversed graph embedding resolves complex single-cell trajectories.

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

Molecular signatures database (MSigDB) 3.0.

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

The Molecular Signatures Database (MSigDB) hallmark gene set collection

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

circlize Implements and enhances circular visualization in R.

1 reference

https://api.crossref.org/works/10.1038%2FS41590-019-0544-5

7 January 2021

10.1038/S41590-019-0544-5

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31745340%20AND%20SRC:MED&resulttype=core&format=json

21 April 2020

1 reference