(Q96690535)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32589017%20AND%20SRC:MED&resulttype=core&format=json

27 June 2020

title

MS-CleanR: A feature-filtering workflow for untargeted LC-MS based metabolomics (English)

1 reference

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27 June 2020

1 reference

10

Hiroshi Tsugawa

1 reference

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27 June 2020

author name string

Ophelie Fraisier-Vannier

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32589017%20AND%20SRC:MED&resulttype=core&format=json

27 June 2020

Justine Chervin

2

1 reference

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27 June 2020

Guillaume Cabanac

3

1 reference

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27 June 2020

Virginie Puech-Pages

4

1 reference

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27 June 2020

Sylvie Fournier

5

1 reference

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27 June 2020

Virginie Durand

6

1 reference

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27 June 2020

Aurelien Amiel

7

1 reference

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27 June 2020

Olivier Andre

8

1 reference

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27 June 2020

Omar Abdelaziz Benamar

9

1 reference

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27 June 2020

Bernard Dumas

11

1 reference

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27 June 2020

Guillaume Marti

12

1 reference

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27 June 2020

publication date

26 June 2020

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27 June 2020

1 reference

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Taxonomically Informed Scoring Enhances Confidence in Natural Products Annotation

27 June 2020

cites work

0 references

Fast unfolding of communities in large networks

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

Systems-Level Annotation of a Metabolomics Data Set Reduces 25 000 Features to Fewer than 1000 Unique Metabolites.

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

A cheminformatics approach to characterize metabolomes in stable-isotope-labeled organisms

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

Mass Spectral Feature List Optimizer (MS-FLO): A Tool To Minimize False Positive Peak Reports in Untargeted Liquid Chromatography-Mass Spectroscopy (LC-MS) Data Processing.

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

Transcriptome analysis highlights preformed defences and signalling pathways controlled by the prAe1 quantitative trait locus (QTL), conferring partial resistance to Aphanomyces euteiches in Medicago truncatula.

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

compMS2Miner: An Automatable Metabolite Identification, Visualization, and Data-Sharing R Package for High-Resolution LC-MS Data Sets.

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

Workflow4Metabolomics: a collaborative research infrastructure for computational metabolomics

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

CliqueMS: A computational tool for annotating in-source metabolite ions from LC-MS untargeted metabolomics data based on a coelution similarity network

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

High-density genome-wide association mapping implicates an F-box encoding gene in Medicago truncatula resistance to Aphanomyces euteiches.

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

Relative mass defect filtering of mass spectra: a path to discovery of plant specialized metabolites.

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

MetFrag relaunched: incorporating strategies beyond in silico fragmentation

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

Protocol: a fast, comprehensive and reproducible one-step extraction method for the rapid preparation of polar and semi-polar metabolites, lipids, proteins, starch and cell wall polymers from a single sample

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

Comprehensive evaluation of untargeted metabolomics data processing software in feature detection, quantification and discriminating marker selection

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

CAMERA: an integrated strategy for compound spectra extraction and annotation of liquid chromatography/mass spectrometry data sets

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

MZmine 2: modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

The landscape of cancer cell line metabolism

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

xMSannotator: An R Package for Network-Based Annotation of High-Resolution Metabolomics Data.

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

Triterpenoid glycosides from Medicago sativa as antifungal agents against Pyricularia oryzae

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

Innovation: Metabolomics: the apogee of the omics trilogy

1 reference

30 November 2021

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MSClust: a tool for unsupervised mass spectra extraction of chromatography-mass spectrometry ion-wise aligned data

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

The Structure and Function of Major Plant Metabolite Modifications

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

Root rot disease of legumes caused by Aphanomyces euteiches

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

Hydrogen Rearrangement Rules: Computational MS/MS Fragmentation and Structure Elucidation Using MS-FINDER Software

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

Systems biology guided by XCMS Online metabolomics

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

Large-Scale Profiling of Saponins in Different Ecotypes of Medicago truncatula

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

Dereplication of microbial metabolites through database search of mass spectra

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

MetAssign: probabilistic annotation of metabolites from LC-MS data using a Bayesian clustering approach.

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

RAMClust: a novel feature clustering method enables spectral-matching-based annotation for metabolomics data

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

Metabolite identification: are you sure? And how do your peers gauge your confidence?

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

Warming differentially influences the effects of drought on stoichiometry and metabolomics in shoots and roots

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

MS-DIAL: data-independent MS/MS deconvolution for comprehensive metabolome analysis

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

CFM-ID 3.0: Significantly Improved ESI-MS/MS Prediction and Compound Identification.

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

The fecal metabolome as a functional readout of the gut microbiome

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

SIRIUS 4: a rapid tool for turning tandem mass spectra into metabolite structure information

1 reference

30 November 2021

https://opencitations.net/index/coci/api/v1/references/10.1021/ACS.ANALCHEM.0C01594

Identifiers

DOI

10.1021/ACS.ANALCHEM.0C01594

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32589017%20AND%20SRC:MED&resulttype=core&format=json

27 June 2020

1 reference