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Chromatin architecture defines the glucocorticoid response
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PubMed
title
Chromatin architecture defines the glucocorticoid response
(English)
1 reference
stated in
PubMed
main subject
glucocorticoid
0 references
author
Trevor K Archer
object named as
Trevor K. Archer
series ordinal
2
0 references
author name string
Craig J. Burd
series ordinal
1
1 reference
stated in
Crossref
language of work or name
English
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stated in
PubMed
publication date
5 November 2013
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stated in
PubMed
published in
Molecular and Cellular Endocrinology
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stated in
PubMed
volume
380
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stated in
PubMed
issue
1-2
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stated in
PubMed
page(s)
25-31
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stated in
PubMed
cites work
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Chromosome-wide mapping of estrogen receptor binding reveals long-range regulation requiring the forkhead protein FoxA1
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Chromatin remodelling by the glucocorticoid receptor requires the BRG1 complex
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FoxA1 binding to the MMTV LTR modulates chromatin structure and transcription
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7 April 2017
Genome-wide analysis of estrogen receptor binding sites
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Opening of compacted chromatin by early developmental transcription factors HNF3 (FoxA) and GATA-4
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The hypersensitive glucocorticoid response specifically regulates period 1 and expression of circadian genes
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Enhancers as information integration hubs in development: lessons from genomics.
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28 September 2017
Analysis of chromatin dynamics during glucocorticoid receptor activation
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PubMed Central
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28 September 2017
DNA demethylation-dependent AR recruitment and GATA factors drive Rhox5 homeobox gene transcription in the epididymis
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PubMed Central
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28 September 2017
Activation of the glucocorticoid receptor is associated with poor prognosis in estrogen receptor-negative breast cancer
1 reference
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PubMed Central
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28 September 2017
Multiple distinct stimuli increase measured nucleosome occupancy around human promoters
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PubMed Central
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28 September 2017
Coactivation of GR and NFKB alters the repertoire of their binding sites and target genes
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3762934
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28 September 2017
Transcription factor AP1 potentiates chromatin accessibility and glucocorticoid receptor binding
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3762934
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28 September 2017
DNA methylation status predicts cell type-specific enhancer activity.
1 reference
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PubMed Central
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28 September 2017
The glucocorticoid receptor and the coregulator Brm selectively modulate each other's occupancy and activity in a gene-specific manner
1 reference
stated in
PubMed Central
reference URL
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28 September 2017
Widespread negative response elements mediate direct repression by agonist-liganded glucocorticoid receptor
1 reference
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PubMed Central
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28 September 2017
Diverse gene reprogramming events occur in the same spatial clusters of distal regulatory elements
1 reference
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PubMed Central
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28 September 2017
Extensive chromatin remodelling and establishment of transcription factor 'hotspots' during early adipogenesis.
1 reference
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28 September 2017
Chromatin higher-order structures and gene regulation
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3762934
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28 September 2017
Chromatin accessibility pre-determines glucocorticoid receptor binding patterns.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3762934
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28 September 2017
Genome-wide analysis of glucocorticoid receptor binding regions in adipocytes reveal gene network involved in triglyceride homeostasis
1 reference
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PubMed Central
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28 September 2017
Nucleosome dynamics define transcriptional enhancers
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3762934
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28 September 2017
Androgen receptor regulates a distinct transcription program in androgen-independent prostate cancer
1 reference
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PubMed Central
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28 September 2017
Long-range activation of FKBP51 transcription by the androgen receptor via distal intronic enhancers
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3762934
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28 September 2017
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PubMed Central
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28 September 2017
Glucocorticoid receptor activation of the Ciz1-Lcn2 locus by long range interactions
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28 September 2017
Genome-wide profiling of PPARgamma:RXR and RNA polymerase II occupancy reveals temporal activation of distinct metabolic pathways and changes in RXR dimer composition during adipogenesis
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28 September 2017
CCCTC-binding factor confines the distal action of estrogen receptor.
1 reference
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3762934
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28 September 2017
Coactivators and nuclear receptor transactivation
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PubMed Central
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28 September 2017
Interaction of the glucocorticoid receptor with the chromatin landscape
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3762934
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28 September 2017
The BRG1 transcriptional coregulator
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3762934
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28 September 2017
Determinants of cell- and gene-specific transcriptional regulation by the glucocorticoid receptor
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PubMed Central
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28 September 2017
Nuclear receptors and chromatin remodeling machinery
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3762934
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28 September 2017
A cell-type-specific transcriptional network required for estrogen regulation of cyclin D1 and cell cycle progression in breast cancer
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3762934
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28 September 2017
Active cytosine demethylation triggered by a nuclear receptor involves DNA strand breaks.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3762934
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28 September 2017
The constantly changing face of chromatin
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3762934
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28 September 2017
ATP-dependent mobilization of the glucocorticoid receptor during chromatin remodeling
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3762934
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28 September 2017
Local DNA demethylation in vertebrates: how could it be performed and targeted?
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28 September 2017
Binding of NF1 to the MMTV promoter in nucleosomes: influence of rotational phasing, translational positioning and histone H1.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3762934
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28 September 2017
Nucleosomes modulate access of transcription factor to the MMTV promoter in vivo and in vitro.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3762934
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28 September 2017
Linker histones H1 and H5 prevent the mobility of positioned nucleosomes
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3762934
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28 September 2017
Sequence-specific positioning of nucleosomes over the steroid-inducible MMTV promoter
1 reference
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PubMed Central
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28 September 2017
Ubiquitous transcription factor OTF-1 mediates induction of the MMTV promoter through synergistic interaction with hormone receptors
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3762934
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28 September 2017
Transcription factor access is mediated by accurately positioned nucleosomes on the mouse mammary tumor virus promoter.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3762934
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28 September 2017
Genomic determination of the glucocorticoid response reveals unexpected mechanisms of gene regulation
1 reference
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PubMed Central
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31 May 2018
FoxA1 binding directs chromatin structure and the functional response of a glucocorticoid receptor-regulated promoter
1 reference
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PubMed Central
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31 May 2018
Hormone action and chromatin remodelling
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3762934
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31 May 2018
Nucleosome positioning modulates accessibility of regulatory proteins to the mouse mammary tumor virus promoter
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3762934
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31 May 2018
Histone acetylation characterizes chromatin presetting by NF1 and Oct1 and enhances glucocorticoid receptor binding to the MMTV promoter.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3762934
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28 November 2018
Histone H2A.Z prepares the prostate specific antigen (PSA) gene for androgen receptor-mediated transcription and is upregulated in a model of prostate cancer progression
1 reference
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PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23545159
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Conserved Histone Variant H2A.Z Protects Euchromatin from the Ectopic Spread of Silent Heterochromatin
2 references
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23545159
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FJ.MCE.2013.03.020
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Genomic footprinting reveals cell type-specific DNA binding of ubiquitous factors
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23545159
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Transcription factor loading on the MMTV promoter: a bimodal mechanism for promoter activation
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23545159
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1016/J.MCE.2013.03.020
0 references
PMCID
3762934
1 reference
stated in
PubMed
PubMed ID
23545159
1 reference
stated in
PubMed
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