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Breaking bad: R-loops and genome integrity
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title
Breaking bad: R-loops and genome integrity
(English)
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PubMed
author name string
Julie Sollier
series ordinal
1
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Karlene A. Cimprich
series ordinal
2
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language of work or name
English
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PubMed
publication date
September 2015
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published in
Trends in Cell Biology
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PubMed
volume
25
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PubMed
issue
9
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PubMed
page(s)
514-22
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PubMed
cites work
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Genome-wide distribution of RNA-DNA hybrids identifies RNase H targets in tRNA genes, retrotransposons and mitochondria
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R-loops induce repressive chromatin marks over mammalian gene terminators
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R-loops associated with triplet repeat expansions promote gene silencing in Friedreich ataxia and fragile X syndrome.
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Genome-wide profiling of yeast DNA:RNA hybrid prone sites with DRIP-chip
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Arginine methylation facilitates the recruitment of TOP3B to chromatin to prevent R loop accumulation.
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R loops are linked to histone H3 S10 phosphorylation and chromatin condensation
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R-loop formation at Snord116 mediates topotecan inhibition of Ube3a-antisense and allele-specific chromatin decondensation.
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28 September 2017
GC skew at the 5' and 3' ends of human genes links R-loop formation to epigenetic regulation and transcription termination
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28 September 2017
ERCC1 and MUS81-EME1 promote sister chromatid separation by processing late replication intermediates at common fragile sites during mitosis
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R-loop stabilization represses antisense transcription at the Arabidopsis FLC locus.
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R loops: from transcription byproducts to threats to genome stability
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R-loop formation is a distinctive characteristic of unmethylated human CpG island promoters
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R-loop-mediated genome instability in mRNA cleavage and polyadenylation mutants
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28 September 2017
RNase H and multiple RNA biogenesis factors cooperate to prevent RNA:DNA hybrids from generating genome instability
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Collisions between replication and transcription complexes cause common fragile site instability at the longest human genes
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R-loop-mediated genomic instability is caused by impairment of replication fork progression
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Regulation of homologous recombination in eukaryotes
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28 September 2017
Loss of Topoisomerase I leads to R-loop-mediated transcriptional blocks during ribosomal RNA synthesis
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28 September 2017
Topoisomerase I suppresses genomic instability by preventing interference between replication and transcription
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28 September 2017
A genome-wide siRNA screen reveals diverse cellular processes and pathways that mediate genome stability
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28 September 2017
The DNA-encoded nucleosome organization of a eukaryotic genome
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28 September 2017
Translocations involving 8q24 in Burkitt lymphoma and other malignant lymphomas: a historical review of cytogenetics in the light of todays knowledge
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28 September 2017
Five years since the discovery of FIP1L1-PDGFRA: what we have learned about the fusion and other molecularly defined eosinophilias
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28 September 2017
The RNA binding protein RNPS1 alleviates ASF/SF2 depletion-induced genomic instability
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28 September 2017
Inactivation of the SR protein splicing factor ASF/SF2 results in genomic instability
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28 September 2017
Intracellular transcription of G-rich DNAs induces formation of G-loops, novel structures containing G4 DNA
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28 September 2017
Senataxin, the ortholog of a yeast RNA helicase, is mutant in ataxia-ocular apraxia 2.
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28 September 2017
Cotranscriptionally Formed DNA:RNA Hybrids Mediate Transcription Elongation Impairment and Transcription-Associated Recombination
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28 September 2017
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28 September 2017
Hypernegative supercoiling of the DNA template during transcription elongation in vitro.
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28 September 2017
The homologous recombination machinery modulates the formation of RNA-DNA hybrids and associated chromosome instability.
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31 May 2018
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BRCA2 prevents R-loop accumulation and associates with TREX-2 mRNA export factor PCID2.
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28 November 2018
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28 November 2018
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12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1016/J.TCB.2015.05.003
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1715264
OpenCitations bibliographic resource ID
1715264
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1715264
PMCID
4554970
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1715264
PubMed ID
26045257
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1715264
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