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Hydrogen bond dynamics in membrane protein function
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PubMed
title
Hydrogen bond dynamics in membrane protein function
(English)
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PubMed
author
Ana-Nicoleta Bondar
object named as
Ana-Nicoleta Bondar
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Stephen H. White
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Stephen H. White
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2
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language of work or name
English
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PubMed
publication date
April 2012
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published in
Biochimica et Biophysica Acta
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PubMed
volume
1818
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PubMed
issue
4
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PubMed
page(s)
942-50
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PubMed
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Structure of Rhomboid Protease in a Lipid Environment
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Lateral opening of a translocon upon entry of protein suggests the mechanism of insertion into membranes
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Structure of a complex of the ATPase SecA and the protein-translocation channel
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Structural basis for intramembrane proteolysis by rhomboid serine proteases
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Atomic-level characterization of the structural dynamics of proteins
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Regulated intramembrane proteolysis: signaling pathways and biological functions
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28 September 2017
Lipid-binding surfaces of membrane proteins: evidence from evolutionary and structural analysis
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Membrane protein folding: how important are hydrogen bonds?
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PubMed Central
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28 September 2017
Dynamics of SecY translocons with translocation-defective mutations
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28 September 2017
Insertion of short transmembrane helices by the Sec61 translocon
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28 September 2017
The lateral gate of SecYEG opens during protein translocation
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28 September 2017
Rhomboid protease dynamics and lipid interactions
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28 September 2017
How translocons select transmembrane helices
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28 September 2017
Crystal structure of the plasma membrane proton pump.
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28 September 2017
Illuminating the mechanistic roles of enzyme conformational dynamics
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PubMed Central
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Conformational complexity of G-protein-coupled receptors
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28 September 2017
Enzymatic analysis of a rhomboid intramembrane protease implicates transmembrane helix 5 as the lateral substrate gate
1 reference
stated in
PubMed Central
reference URL
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28 September 2017
Nanodiscs unravel the interaction between the SecYEG channel and its cytosolic partner SecA.
1 reference
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PubMed Central
reference URL
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28 September 2017
Bilayer thickness and membrane protein function: an energetic perspective.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3288666
retrieved
28 September 2017
Structural analysis of a rhomboid family intramembrane protease reveals a gating mechanism for substrate entry
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3288666
retrieved
28 September 2017
How hydrogen bonds shape membrane protein structure.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3288666
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28 September 2017
Changes in interhelical hydrogen bonding upon rhodopsin activation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3288666
retrieved
28 September 2017
Reconstitution of intramembrane proteolysis in vitro reveals that pure rhomboid is sufficient for catalysis and specificity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3288666
retrieved
28 September 2017
Lipids do influence protein function-the hydrophobic matching hypothesis revisited
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3288666
retrieved
28 September 2017
How lipids affect the activities of integral membrane proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3288666
retrieved
28 September 2017
Lipids in membrane protein structures
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3288666
retrieved
28 September 2017
Intramembrane proteolysis: theme and variations.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3288666
retrieved
28 September 2017
Drosophila rhomboid-1 defines a family of putative intramembrane serine proteases
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3288666
retrieved
28 September 2017
Structure and function in rhodopsin: rhodopsin mutants with a neutral amino acid at E134 have a partially activated conformation in the dark state
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3288666
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28 September 2017
Modulation of rhodopsin function by properties of the membrane bilayer
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3288666
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28 September 2017
Signal sequence recognition in posttranslational protein transport across the yeast ER membrane.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3288666
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31 May 2018
Functional role of the "ionic lock"--an interhelical hydrogen-bond network in family A heptahelical receptors.
1 reference
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PubMed Central
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28 November 2018
Interactions between phosphatidylethanolamine headgroup and LmrP, a multidrug transporter: a conserved mechanism for proton gradient sensing?
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3288666
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28 November 2018
Mutations in the Sec61p Channel Affecting Signal Sequence Recognition and Membrane Protein Topology
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3288666
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28 November 2018
Crystal structure of a rhomboid family intramembrane protease.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3288666
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28 November 2018
The retinal conformation and its environment in rhodopsin in light of a new 2.2 A crystal structure
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3288666
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28 November 2018
Interhelical hydrogen bonds and spatial motifs in membrane proteins: polar clamps and serine zippers
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3288666
retrieved
28 November 2018
Identifiers
DOI
10.1016/J.BBAMEM.2011.11.035
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PMC publication ID
3288666
1 reference
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PubMed
PubMed publication ID
22178866
1 reference
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PubMed
ResearchGate publication ID
51897440
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