(Q28709618)

21 June 2017

title

Capturing chloroplast variation for molecular ecology studies: a simple next generation sequencing approach applied to a rainforest tree (English)

1 reference

21 June 2017

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10

Maurizio Rossetto

1 reference

21 June 2017

Paul D Rymer

7

1 reference

ORCID Public Data File 2021

Robert J. Henry

object named as

Robert J Henry

5

1 reference

ORCID Public Data File 2021

Marlien van der Merwe

2

object named as

Marlien van der Merwe

1 reference

21 June 2017

Hannah McPherson

1

1 reference

21 June 2017

Sven K Delaney

3

1 reference

21 June 2017

Mark A Edwards

4

1 reference

21 June 2017

Emma McIntosh

6

1 reference

21 June 2017

Melita L Milner

8

1 reference

21 June 2017

Juelian Siow

9

1 reference

21 June 2017

language of work or name

English

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publication date

14 March 2013

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21 June 2017

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21 June 2017

volume

13

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21 June 2017

issue

1

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page(s)

8

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maintained by WikiProject

21 June 2017

1 reference

Genomic diversity in switchgrass (Panicum virgatum): from the continental scale to a dune landscape

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3605380

Applications of next generation sequencing in molecular ecology of non-model organisms

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3605380

Increasing phylogenetic resolution at low taxonomic levels using massively parallel sequencing of chloroplast genomes

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3605380

Multiplex sequencing of plant chloroplast genomes using Solexa sequencing-by-synthesis technology

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3605380

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3605380

The complete chloroplast genome sequence of Citrus sinensis (L.) Osbeck var 'Ridge Pineapple': organization and phylogenetic relationships to other angiosperms

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3605380

Rapid and accurate pyrosequencing of angiosperm plastid genomes

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3605380

Glacial refugia and reticulate evolution: the case of the Tasmanian eucalypts

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3605380

Primer3 on the WWW for general users and for biologist programmers

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3605380

Next-generation DNA sequencing

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3605380

Chloroplast genome sequence confirms distinctness of Australian and Asian wild rice

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3605380

Soil sampling and isolation of extracellular DNA from large amount of starting material suitable for metabarcoding studies.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3605380

Navigating the tip of the genomic iceberg: Next-generation sequencing for plant systematics.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3605380

An efficient procedure for plant organellar genome assembly, based on whole genome data from the 454 GS FLX sequencing platform

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3605380

Complete chloroplast genome sequence of Magnolia kwangsiensis (Magnoliaceae): implication for DNA barcoding and population genetics

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3605380

Short reads and nonmodel species: exploring the complexities of next-generation sequence assembly and SNP discovery in the absence of a reference genome

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3605380

Limitations of next-generation genome sequence assembly

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3605380

Whole genome sequencing of enriched chloroplast DNA using the Illumina GAII platform

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3605380

Rapidly denoising pyrosequencing amplicon reads by exploiting rank-abundance distributions

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3605380

Assembly of large genomes using second-generation sequencing

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3605380

The distribution of Quercus suber chloroplast haplotypes matches the palaeogeographical history of the western Mediterranean.

3 June 2018

1 reference

https://api.crossref.org/works/10.1186%2F1472-6785-13-8

Chloroplast DNA variation and postglacial recolonization of common ash (Fraxinus excelsior L.) in Europe.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1472-6785-13-8

Chloroplast genome sequences from total DNA for plant identification.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1472-6785-13-8

Targeted enrichment strategies for next-generation plant biology.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1472-6785-13-8

Patterns of MADS-box gene expression mark flower-type development in Gerbera hybrida (Asteraceae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1472-6785-13-8

A new set of universal de novo sequencing primers for extensive coverage of noncoding chloroplast DNA: new opportunities for phylogenetic studies and cpSSR discovery.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1472-6785-13-8

New generation sequencers as a tool for genotyping of highly polymorphic multilocus MHC system

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1472-6785-13-8

Chloroplast DNA supports a hypothesis of glacial refugia over postglacial recolonization in disjunct populations of black pine (Pinus nigra) in western Europe

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3605380

Methods for obtaining and analyzing whole chloroplast genome sequences.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3605380

27 November 2018

Identifiers

DOI

10.1186/1472-6785-13-8

1 reference

Dimensions Publication ID

21 June 2017

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/1472-6785-13-8

OpenCitations bibliographic resource ID

2932293

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2932293

1 reference