(Q30537985)

15 August 2017

An RNA recognition motif-containing protein is required for plastid RNA editing in Arabidopsis and maize (English)

1 reference

RNA recognition motif domain

15 August 2017

1 reference

2

Arnaud Germain

1 reference

15 August 2017

7

Stéphane Bentolila

1 reference

15 August 2017

6

Maureen R Hanson

1 reference

15 August 2017

3

Ludovic Giloteaux

1 reference

15 August 2017

Tao Sun

1

1 reference

15 August 2017

Kamel Hammani

series ordinal

4

1 reference

15 August 2017

Alice Barkan

series ordinal

5

1 reference

15 August 2017

language of work or name

English

0 references

publication date

4 March 2013

1 reference

Proceedings of the National Academy of Sciences of the United States of America

15 August 2017

1 reference

15 August 2017

110

1 reference

15 August 2017

12

1 reference

15 August 2017

E1169-78

1 reference

describes a project that uses

15 August 2017

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3607000/fullTextXML

inferred from PubMed Central ID database lookup

cites work

RIP1, a member of an Arabidopsis protein family, interacts with the protein RARE1 and broadly affects RNA editing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

Multiple organellar RNA editing factor (MORF) family proteins are required for RNA editing in mitochondria and plastids of plants

20 June 2018

1 reference

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The rice pentatricopeptide repeat protein RF5 restores fertility in Hong-Lian cytoplasmic male-sterile lines via a complex with the glycine-rich protein GRP162.

20 June 2018

1 reference

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20 June 2018

1 reference

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The pentatricopeptide repeat protein OTP87 is essential for RNA editing of nad7 and atp1 transcripts in Arabidopsis mitochondria

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

The RNA-recognition motif in chloroplasts

20 June 2018

1 reference

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Natural variation in Arabidopsis leads to the identification of REME1, a pentatricopeptide repeat-DYW protein controlling the editing of mitochondrial transcripts

20 June 2018

1 reference

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20 June 2018

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The Sequence Alignment/Map format and SAMtools

20 June 2018

1 reference

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MEME SUITE: tools for motif discovery and searching

20 June 2018

1 reference

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A comparative genomics approach identifies a PPR-DYW protein that is essential for C-to-U editing of the Arabidopsis chloroplast accD transcript

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

Chloroplast ribonucleoprotein CP31A is required for editing and stability of specific chloroplast mRNAs.

20 June 2018

1 reference

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TopHat: discovering splice junctions with RNA-Seq

20 June 2018

1 reference

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A plant-specific RNA-binding domain revealed through analysis of chloroplast group II intron splicing

20 June 2018

1 reference

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Sequence-specific binding of a chloroplast pentatricopeptide repeat protein to its native group II intron ligand.

20 June 2018

1 reference

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The Arabidopsis thaliana response regulator ARR22 is a putative AHP phospho-histidine phosphatase expressed in the chalaza of developing seeds

20 June 2018

1 reference

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A rapid high-throughput method for the detection and quantification of RNA editing based on high-resolution melting of amplicons

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

Assay of editing of exogenous RNAs in chloroplast extracts of Arabidopsis, maize, pea, and tobacco

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

Genetic architecture of mitochondrial editing in Arabidopsis thaliana

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

Cold shock domain proteins and glycine-rich RNA-binding proteins from Arabidopsis thaliana can promote the cold adaptation process in Escherichia coli

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

Identification of a sequence motif critical for editing of a tobacco chloroplast transcript

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

Cold-inducible zinc finger-containing glycine-rich RNA-binding protein contributes to the enhancement of freezing tolerance in Arabidopsis thaliana

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

The RNA recognition motif, a plastic RNA-binding platform to regulate post-transcriptional gene expression

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

Different patterns in the recognition of editing sites in plant mitochondria

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

Genetics and genomics of chloroplast biogenesis: maize as a model system

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

Cross-competition in transgenic chloroplasts expressing single editing sites reveals shared cis elements

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

Recognition of RNA editing sites is directed by unique proteins in chloroplasts: biochemical identification of cis-acting elements and trans-acting factors involved in RNA editing in tobacco and pea chloroplasts

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

A family of RRM-type RNA-binding proteins specific to plant mitochondria.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

Genome analysis: RNA recognition motif (RRM) and K homology (KH) domain RNA-binding proteins from the flowering plant Arabidopsis thaliana

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

Involvement of a site-specific trans-acting factor and a common RNA-binding protein in the editing of chloroplast mRNAs: development of a chloroplast in vitro RNA editing system

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

Functions and mechanisms of RNA editing

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

Predicting subcellular localization of proteins based on their N-terminal amino acid sequence

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

Molecular cloning of apobec-1 complementation factor, a novel RNA-binding protein involved in the editing of apolipoprotein B mRNA.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

RNA editing in Arabidopsis mitochondria effects 441 C to U changes in ORFs

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

The chloroplast ycf3 and ycf4 open reading frames of Chlamydomonas reinhardtii are required for the accumulation of the photosystem I complex

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

Targeted inactivation of a tobacco intron-containing open reading frame reveals a novel chloroplast-encoded photosystem I-related gene

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

In vivo dissection of cis-acting determinants for plastid RNA editing

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

RNA editing in plant mitochondria and chloroplasts

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

Studies on the transformation of intact yeast cells by the LiAc/SS-DNA/PEG procedure

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

The neighbor-joining method: a new method for reconstructing phylogenetic trees

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

RNA editing in plant mitochondria

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

RNA editing in wheat mitochondria results in the conservation of protein sequences

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

RNA editing in plant mitochondria

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

Diversity of a ribonucleoprotein family in tobacco chlorplasts: two new chloroplast ribonucleoproteins and a phylogenetic tree of ten chloroplast RNA-binding domains

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

A single nuclear gene specifies the abundance and extent of RNA editing of a plant mitochondrial transcript.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

CLB19, a pentatricopeptide repeat protein required for editing of rpoA and clpP chloroplast transcripts.

20 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1220162110

The pentatricopeptide repeat protein OTP82 is required for RNA editing of plastid ndhB and ndhG transcripts

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1220162110

A study of new Arabidopsis chloroplast RNA editing mutants reveals general features of editing factors and their target sites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1220162110

Sequence elements critical for efficient RNA editing of a tobacco chloroplast transcript in vivo and in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1220162110

An in vitro RNA editing system from cauliflower mitochondria: editing site recognition parameters can vary in different plant species

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1220162110

A pentatricopeptide repeat protein is a site recognition factor in chloroplast RNA editing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1220162110

The moss pentatricopeptide repeat protein with a DYW domain is responsible for RNA editing of mitochondrial ccmFc transcript.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1220162110

Arabidopsis chloroplast RNA binding proteins CP31A and CP29A associate with large transcript pools and confer cold stress tolerance by influencing multiple chloroplast RNA processing steps

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1220162110

Predotar: A tool for rapidly screening proteomes for N-terminal targeting sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1220162110

Mutational analysis of Arabidopsis chloroplast polynucleotide phosphorylase reveals roles for both RNase PH core domains in polyadenylation, RNA 3'-end maturation and intron degradation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1220162110

Analysis of the subcellular localization, function, and proteolytic control of the Arabidopsis cyclin-dependent kinase inhibitor ICK1/KRP1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1220162110

A hypothesis on the identification of the editing enzyme in plant organelles

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1220162110

Pentatricopeptide repeat proteins with the DYW motif have distinct molecular functions in RNA editing and RNA cleavage in Arabidopsis chloroplasts

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1220162110

Use of Illumina sequencing to identify transposon insertions underlying mutant phenotypes in high-copy Mutator lines of maize.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3607000

PPR proteins network as site-specific RNA editing factors in plant organelles

26 November 2018

1 reference

12 December 2020

Nuclear Mutants of Maize with Defects in Chloroplast Polysome Assembly Have Altered Chloroplast RNA Metabolism

1 reference

12 December 2020

APO1 promotes the splicing of chloroplast group II introns and harbors a plant-specific zinc-dependent RNA binding domain

1 reference

12 December 2020

Mutations of cytochrome b6 in Chlamydomonas reinhardtii disclose the functional significance for a proline to leucine conversion by petB editing in maize and tobacco

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.1220162110

1 reference

15 August 2017

0 references

1 reference

15 August 2017

PubMed publication ID

23487777

1 reference