(Q30602624)

14 October 2017

Transcript abundance on its own cannot be used to infer fluxes in central metabolism (English)

1 reference

14 October 2017

12

1 reference

PubMed publication ID

25 June 2017

Eberhard Munz

5

0 references

Henning Redestig

Henning Redestig

10

0 references

Ljudmilla Borisjuk

Ljudmilla Borisjuk

13

0 references

Hardy Rolletschek

14

Hardy Rolletschek

1 reference

14 October 2017

Jörg Schwender

1

1 reference

14 October 2017

Christina König

2

1 reference

14 October 2017

Matthias Klapperstück

3

1 reference

14 October 2017

Nicolas Heinzel

4

1 reference

14 October 2017

Inga Hebbelmann

6

1 reference

14 October 2017

Jordan O Hay

7

1 reference

14 October 2017

Peter Denolf

8

1 reference

14 October 2017

Stefanie De Bodt

9

1 reference

14 October 2017

Evelyne Caestecker

11

1 reference

14 October 2017

28 November 2014

1 reference

Frontiers in Plant Science

14 October 2017

1 reference

14 October 2017

5

1 reference

14 October 2017

668

1 reference

describes a project that uses

14 October 2017

DESeq2

DESeq

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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Integration of a constraint-based metabolic model of Brassica napus developing seeds with (13)C-metabolic flux analysis

20 June 2018

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What mRNA Abundances Can Tell us about Metabolism

20 June 2018

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Transcriptional regulation is insufficient to explain substrate-induced flux changes in Bacillus subtilis

20 June 2018

1 reference

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Reconstruction of protein networks from an atlas of maize seed proteotypes.

20 June 2018

1 reference

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Systems analysis of metabolic phenotypes: what have we learnt?

20 June 2018

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Nuclear magnetic resonance imaging of lipid in living plants

20 June 2018

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Comprehensive developmental profiles of gene activity in regions and subregions of the Arabidopsis seed.

20 June 2018

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Functioning of a metabolic flux sensor in Escherichia coli.

20 June 2018

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Regulation of yeast central metabolism by enzyme phosphorylation

20 June 2018

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VANTED v2: a framework for systems biology applications

20 June 2018

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Systems-based analysis of Arabidopsis leaf growth reveals adaptation to water deficit

20 June 2018

1 reference

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Feedback regulation of plastidic acetyl-CoA carboxylase by 18:1-acyl carrier protein in Brassica napus.

20 June 2018

1 reference

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Phosphoproteomic analysis of seed maturation in Arabidopsis, rapeseed, and soybean

20 June 2018

1 reference

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Comparative deep transcriptional profiling of four developing oilseeds

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4246676

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

20 June 2018

1 reference

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Comparative transcriptome and metabolite analysis of oil palm and date palm mesocarp that differ dramatically in carbon partitioning

20 June 2018

1 reference

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Full-length transcriptome assembly from RNA-Seq data without a reference genome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4246676

Analysis of gene expression in resynthesized Brassica napus allotetraploids: transcriptional changes do not explain differential protein regulation.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4246676

Ribosome and transcript copy numbers, polysome occupancy and enzyme dynamics in Arabidopsis.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4246676

Non-invasive mapping of lipids in plant tissue using magnetic resonance imaging

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4246676

An AP2-type transcription factor, WRINKLED1, of Arabidopsis thaliana binds to the AW-box sequence conserved among proximal upstream regions of genes involved in fatty acid synthesis.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4246676

TopHat: discovering splice junctions with RNA-Seq

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4246676

Metabolic flux analysis as a tool in metabolic engineering of plants

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4246676

The fluxes through glycolytic enzymes in Saccharomyces cerevisiae are predominantly regulated at posttranscriptional levels

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4246676

Improved scoring of functional groups from gene expression data by decorrelating GO graph structure

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4246676

Rubisco without the Calvin cycle improves the carbon efficiency of developing green seeds.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4246676

THE ORGANIZATION AND REGULATION OF PLANT GLYCOLYSIS.

20 June 2018

1 reference

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MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes

20 June 2018

1 reference

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The metabolic architecture of plant cells. Stability of central metabolism and flexibility of anabolic pathways during the growth cycle of tomato cells

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4246676

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4246676

Carbon and nitrogen provisions alter the metabolic flux in developing soybean embryos

20 June 2018

1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2014.00668

Seed architecture shapes embryo metabolism in oilseed rape.

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2014.00668

Role of transcriptional regulation in controlling fluxes in central carbon metabolism of Saccharomyces cerevisiae. A chemostat culture study.

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2014.00668

Proteins of diverse function and subcellular location are lysine acetylated in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2014.00668

Choreography of Transcriptomes and Lipidomes of Nannochloropsis Reveals the Mechanisms of Oil Synthesis in Microalgae.

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2014.00668

Biochemical and physiological studies of Arabidopsis thaliana transgenic lines with repressed expression of the mitochondrial pyruvate dehydrogenase kinase

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2014.00668

The metabolic flux phenotype of heterotrophic Arabidopsis cells reveals a flexible balance between the cytosolic and plastidic contributions to carbohydrate oxidation in response to phosphate limitation.

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2014.00668

Identification of novel transcripts in annotated genomes using RNA-Seq

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2014.00668

Positional cues for the starch/lipid balance in maize kernels and resource partitioning to the embryo

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2014.00668

Evidence of a key role for photosynthetic oxygen release in oil storage in developing soybean seeds

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2014.00668

Metabolic control analysis of developing oilseed rape (Brassica napus cv Westar) embryos shows that lipid assembly exerts significant control over oil accumulation

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2014.00668

Metabolic network fluxes in heterotrophic Arabidopsis cells: stability of the flux distribution under different oxygenation conditions

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2014.00668

A genome-scale metabolic model accurately predicts fluxes in central carbon metabolism under stress conditions.

21 January 2018

1 reference

https://api.crossref.org/works/10.3389%2FFPLS.2014.00668

Predictive modeling of biomass component tradeoffs in Brassica napus developing oilseeds based on in silico manipulation of storage metabolism

21 January 2018

1 reference

12 December 2020

On the discordance of metabolomics with proteomics and transcriptomics: coping with increasing complexity in logic, chemistry, and network interactions scientific correspondence

1 reference

12 December 2020

Mitochondrial metabolism in developing embryos of Brassica napus

1 reference

12 December 2020

Role of WRINKLED1 in the transcriptional regulation of glycolytic and fatty acid biosynthetic genes in Arabidopsis

1 reference

12 December 2020

Carbon conversion efficiency and central metabolic fluxes in developing sunflower (Helianthus annuus L.) embryos

1 reference

12 December 2020

Robustness of central carbohydrate metabolism in developing maize kernels

1 reference

12 December 2020

Identifiers

DOI

10.3389/FPLS.2014.00668

1 reference

14 October 2017

1 reference

14 October 2017

PubMed publication ID

25506350

1 reference