(Q34020270)

30 July 2017

title

Computational generation and screening of RNA motifs in large nucleotide sequence pools (English)

1 reference

30 July 2017

5

Tamar Schlick

1 reference

30 July 2017

Namhee Kim

1

1 reference

30 July 2017

Joseph A Izzo

series ordinal

2

1 reference

30 July 2017

Shereef Elmetwaly

series ordinal

3

1 reference

30 July 2017

Hin Hark Gan

series ordinal

4

1 reference

30 July 2017

language of work or name

English

0 references

publication date

6 May 2010

1 reference

30 July 2017

published in

Nucleic Acids Research

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30 July 2017

volume

38

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30 July 2017

issue

13

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30 July 2017

page(s)

e139

1 reference

Creative Commons Attribution-NonCommercial 2.5 Generic

30 July 2017

copyright license

start time

7 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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28 July 2018

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28 July 2018

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28 July 2018

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A computational proposal for designing structured RNA pools for in vitro selection of RNAs

28 July 2018

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A mathematical analysis of SELEX

28 July 2018

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Prediction of RNA secondary structure by free energy minimization

28 July 2018

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Complete probabilistic analysis of RNA shapes

28 July 2018

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A therapeutic aptamer inhibits angiogenesis by specifically targeting the heparin binding domain of VEGF165

28 July 2018

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Abundance of correctly folded RNA motifs in sequence space, calculated on computational grids

28 July 2018

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Size, constant sequences, and optimal selection

28 July 2018

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28 July 2018

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In vitro RNA random pools are not structurally diverse: a computational analysis

28 July 2018

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De novo synthesis and development of an RNA enzyme

28 July 2018

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Directed evolution of nucleic acid enzymes

28 July 2018

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Regulating eukaryotic gene expression with aptamers.

28 July 2018

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Informational complexity and functional activity of RNA structures

28 July 2018

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Protein structure prediction using Rosetta

28 July 2018

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Prospects for antiviral ribozymes and deoxyribozymes

28 July 2018

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Vienna RNA secondary structure server

28 July 2018

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RNAMotif, an RNA secondary structure definition and search algorithm

28 July 2018

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In vitro selection of functional nucleic acids

28 July 2018

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Adaptive recognition by nucleic acid aptamers

28 July 2018

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A complex ligase ribozyme evolved in vitro from a group I ribozyme domain

28 July 2018

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Nucleic acid molecular switches

28 July 2018

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The distribution of RNA motifs in natural sequences

28 July 2018

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Saccharide-RNA recognition in a complex formed between neomycin B and an RNA aptamer

28 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2910066

Engineering precision RNA molecular switches

28 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2910066

In vitro selection and characterization of streptomycin-binding RNAs: recognition discrimination between antibiotics

28 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2910066

RNA aptamers to the peptidyl transferase inhibitor chloramphenicol

28 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2910066

An RNA motif that binds ATP

28 July 2018

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Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase

28 July 2018

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SELEXION. Systematic evolution of ligands by exponential enrichment with integrated optimization by non-linear analysis

28 July 2018

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Pattern searching/alignment with RNA primary and secondary structures: an effective descriptor for tRNA

28 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2910066

Comparing multiple RNA secondary structures using tree comparisons

28 July 2018

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In vitro selection of RNA molecules that bind specific ligands

28 July 2018

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In vivo-applied functional RNAs as tools in proteomics and genomics research

28 July 2018

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Ribozymes in the age of molecular therapeutics

21 January 2018

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A mathematical analysis of in vitro molecular selection-amplification

21 January 2018

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https://api.crossref.org/works/10.1093%2FNAR%2FGKQ282

Predicting candidate genomic sequences that correspond to synthetic functional RNA motifs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ282

RagPools: RNA-As-Graph-Pools--a web server for assisting the design of structured RNA pools for in vitro selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ282

Mersenne twister: a 623-dimensionally equidistributed uniform pseudo-random number generator

21 January 2018

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https://api.crossref.org/works/10.1093%2FNAR%2FGKQ282

Emergence of a fast-reacting ribozyme that is capable of undergoing continuous evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ282

Generation of a catalytic module on a self-folding RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ282

The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ282

RNAshapes: an integrated RNA analysis package based on abstract shapes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ282

Allosteric nucleic acid catalysts

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ282

A novel RNA motif for neomycin recognition

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20448026

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKQ282

1 reference

30 July 2017

1 reference

30 July 2017

1 reference