(Q34044490)

30 July 2017

title

The effect of tRNA levels on decoding times of mRNA codons (English)

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30 July 2017

Tamir Tuller

2

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author name string

Alexandra Dana

series ordinal

1

1 reference

30 July 2017

language of work or name

English

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publication date

23 July 2014

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30 July 2017

published in

Nucleic Acids Research

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30 July 2017

volume

42

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30 July 2017

issue

14

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30 July 2017

page(s)

9171-9181

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Creative Commons Attribution-NonCommercial 4.0 International

30 July 2017

copyright license

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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A "silent" polymorphism in the MDR1 gene changes substrate specificity

5 July 2018

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5 July 2018

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Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise

5 July 2018

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5 July 2018

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Codon usage bias from tRNA's point of view: redundancy, specialization, and efficient decoding for translation optimization

5 July 2018

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Solving the riddle of codon usage preferences: a test for translational selection

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4132755

Codon bias and heterologous protein expression

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4132755

Hierarchy of sequence-dependent features associated with prokaryotic translation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4132755

Global analysis of protein expression in yeast

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4132755

Genome-wide analysis of mRNA translation profiles in Saccharomyces cerevisiae

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4132755

Precision and functional specificity in mRNA decay

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4132755

tRNA gene number and codon usage in the C. elegans genome are co-adapted for optimal translation of highly expressed genes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4132755

Studies of codon usage and tRNA genes of 18 unicellular organisms and quantification of Bacillus subtilis tRNAs: gene expression level and species-specific diversity of codon usage based on multivariate analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4132755

Cotranslational protein folding

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4132755

Translational efficiency is regulated by the length of the 3' untranslated region

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4132755

Point mutations close to the AUG initiator codon affect the efficiency of translation of rat preproinsulin in vivo

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4132755

Quantities of individual aminoacyl-tRNA families and their turnover in Escherichia coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4132755

Codon usage and tRNA content in unicellular and multicellular organisms

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4132755

The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4132755

Coevolution of codon usage and transfer RNA abundance

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4132755

Ribosome motions modulate electrostatic properties

5 July 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU646

Evolutionary conservation of codon optimality reveals hidden signatures of cotranslational folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU646

A new look at the statistical model identification

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU646

Totally asymmetric exclusion process with extended objects: A model for protein synthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU646

Co-variation of tRNA abundance and codon usage in Escherichia coli at different growth rates.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU646

Transient ribosomal attenuation coordinates protein synthesis and co-translational folding.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU646

Prediction of variable translation rate effects on cotranslational protein folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU646

Kinetic modelling indicates that fast-translating codons can coordinate cotranslational protein folding by avoiding misfolded intermediates.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4132755

Correlation between the abundance of yeast transfer RNAs and the occurrence of the respective codons in protein genes. Differences in synonymous codon choice patterns of yeast and Escherichia coli with reference to the abundance of isoaccepting tran

28 October 2018

1 reference

12 December 2020

Study of faecal shedding of Clostridium difficile in horses treated with penicillin

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12 December 2020

Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes

1 reference

12 December 2020

Concerted action of the ribosome and the associated chaperone trigger factor confines nascent polypeptide folding

1 reference

12 December 2020

Kinetics of translation of gamma B crystallin and its circularly permutated variant in an in vitro cell-free system: possible relations to codon distribution and protein folding

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKU646

1 reference

30 July 2017

1 reference

30 July 2017

1 reference