(Q34284478)

1 August 2017

title

Diverse sulfate-reducing bacteria of the Desulfosarcina/Desulfococcus clade are the key alkane degraders at marine seeps (English)

1 reference

1 August 2017

0 references

Florian-Alexander Herbst

2

Florian-Alexander Herbst

1 reference

1 August 2017

Florin Musat

9

0 references

Sara Kleindienst

Sara Kleindienst

1

0 references

Tillmann Lueders

Tillmann Lueders

10

0 references

Jana Seifert

Jana Seifert

6

0 references

Martin von Bergen

5

Martin von Bergen

1 reference

1 August 2017

11

Katrin Knittel

1 reference

1 August 2017

8

Rudolf Amann

1 reference

1 August 2017

Marion Stagars

3

1 reference

1 August 2017

Frederick von Netzer

4

1 reference

1 August 2017

Jörg Peplies

7

1 reference

1 August 2017

publication date

10 April 2014

1 reference

1 August 2017

1 reference

1 August 2017

volume

8

1 reference

1 August 2017

issue

10

1 reference

1 August 2017

page(s)

2029-2044

1 reference

Geomicrobiological linkages between short-chain alkane consumption and sulfate reduction rates in seep sediments

1 August 2017

cites work

1 reference

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Microbial communities of deep-sea methane seeps at Hikurangi continental margin (New Zealand)

6 July 2018

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Insights into the phylogeny and coding potential of microbial dark matter

6 July 2018

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Hydrocarbon-degrading bacteria enriched by the Deepwater Horizon oil spill identified by cultivation and DNA-SIP.

6 July 2018

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Anaerobic oxidation of short-chain alkanes in hydrothermal sediments: potential influences on sulfur cycling and microbial diversity

6 July 2018

1 reference

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Elucidation of in situ polycyclic aromatic hydrocarbon degradation by functional metaproteomics (protein-SIP).

6 July 2018

1 reference

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Ecology of marine Bacteroidetes: a comparative genomics approach

6 July 2018

1 reference

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Anaerobic degradation of propane and butane by sulfate-reducing bacteria enriched from marine hydrocarbon cold seeps

6 July 2018

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The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

6 July 2018

1 reference

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Enhanced gene detection assays for fumarate-adding enzymes allow uncovering of anaerobic hydrocarbon degraders in terrestrial and marine systems

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Distribution and in situ abundance of sulfate-reducing bacteria in diverse marine hydrocarbon seep sediments

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Testing the limits of 454 pyrotag sequencing: reproducibility, quantitative assessment and comparison to T-RFLP fingerprinting of aquifer microbes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Characterization of the anaerobic microbial community in oil-polluted subtidal sediments: aromatic biodegradation potential after the Prestige oil spill.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Visualization of candidate division OP3 cocci in limonene-degrading methanogenic cultures

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Microbial diversity in deep-sea methane seep sediments presented by SSU rRNA gene tag sequencing

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Anaerobic oxidation of methane at different temperature regimes in Guaymas Basin hydrothermal sediments

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Natural gas and temperature structured a microbial community response to the Deepwater Horizon oil spill.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Identification of the dominant sulfate-reducing bacterial partner of anaerobic methanotrophs of the ANME-2 clade

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Hydrocarbon-degrading bacteria and the bacterial community response in gulf of Mexico beach sands impacted by the deepwater horizon oil spill

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Thermophilic anaerobic oxidation of methane by marine microbial consortia

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Enrichment of a microbial community performing anaerobic oxidation of methane in a continuous high-pressure bioreactor

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Diversity and spatial distribution of prokaryotic communities along a sediment vertical profile of a deep-sea mud volcano

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Marine integrons containing novel integrase genes, attachment sites, attI, and associated gene cassettes in polluted sediments from Suez and Tokyo Bays.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Update of the All-Species Living Tree Project based on 16S and 23S rRNA sequence analyses

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Deep-sea oil plume enriches indigenous oil-degrading bacteria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Identification of Novel Methane-, Ethane-, and Propane-Oxidizing Bacteria at Marine Hydrocarbon Seeps by Stable Isotope Probing

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Phylogenetic diversity and metagenomics of candidate division OP3.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Molecular biologic techniques applied to the microbial prospecting of oil and gas in the Ban 876 gas and oil field in China

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Spatial structure and activity of sedimentary microbial communities underlying a Beggiatoa spp. mat in a Gulf of Mexico hydrocarbon seep

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

A novel arsenate respiring isolate that can utilize aromatic substrates

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Anaerobic oxidation of methane: progress with an unknown process

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

T-REX: software for the processing and analysis of T-RFLP data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Improving protein extraction and separation methods for investigating the metaproteome of anaerobic benzene communities within sediments.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Simple and safe method for simultaneous isolation of microbial RNA and DNA from problematic populations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

TRiFLe, a program for in silico terminal restriction fragment length polymorphism analysis with user-defined sequence sets

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Incorporation of carbon and nitrogen atoms into proteins measured by protein-based stable isotope probing (Protein-SIP).

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Biogeochemistry and community composition of iron- and sulfur-precipitating microbial mats at the Chefren mud volcano (Nile Deep Sea Fan, Eastern Mediterranean)

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

OpenMS - an open-source software framework for mass spectrometry

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Diversity and abundance of aerobic and anaerobic methane oxidizers at the Haakon Mosby Mud Volcano, Barents Sea

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Oceanic methane biogeochemistry

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Marine microorganisms make a meal of oil.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Open mass spectrometry search algorithm

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

ARB: a software environment for sequence data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Stable isotope probing of rRNA and DNA reveals a dynamic methylotroph community and trophic interactions with fungi and protozoa in oxic rice field soil

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Molecular Characterization of Sulfate-Reducing Bacteria in the Guaymas Basin

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Fluorescence in situ hybridization of 16S rRNA gene clones (Clone-FISH) for probe validation and screening of clone libraries

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Microbial diversity of hydrothermal sediments in the Guaymas Basin: evidence for anaerobic methanotrophic communities

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Comparative analysis of methane-oxidizing archaea and sulfate-reducing bacteria in anoxic marine sediments.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Anaerobic initial reaction of n-alkanes in a denitrifying bacterium: evidence for (1-methylpentyl)succinate as initial product and for involvement of an organic radical in n-hexane metabolism.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Anaerobic naphthalene degradation by a sulfate-reducing enrichment culture

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Probability-based protein identification by searching sequence databases using mass spectrometry data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Initial reactions in anaerobic alkane degradation by a sulfate reducer, strain AK-01

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Anaerobic oxidation of o-xylene, m-xylene, and homologous alkylbenzenes by new types of sulfate-reducing bacteria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Growth, natural relationships, cellular fatty acids and metabolic adaptation of sulfate-reducing bacteria that utilize long-chain alkanes under anoxic conditions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

DNA recovery from soils of diverse composition.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Structure of microbial communities and hydrocarbon-dependent sulfate reduction in the anoxic layer of a polluted microbial mat.

6 July 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.51

Deep-sea bacteria enriched by oil and dispersant from the Deepwater Horizon spill

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.51

Anaerobic alkane-degrading strain AK-01 contains two alkylsuccinate synthase genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.51

Diversity of benzyl- and alkylsuccinate synthase genes in hydrocarbon-impacted environments and enrichment cultures

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.51

Limitations of microbial hydrocarbon degradation at the Amon mud volcano (Nile deep-sea fan)

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.51

Genes encoding the candidate enzyme for anaerobic activation of n-alkanes in the denitrifying bacterium, strain HxN1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.51

Co-occurrence of denitrification and nitrogen fixation in a meromictic lake, Lake Cadagno (Switzerland).

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.51

The anaerobic oxidation of methane and sulfate reduction in sediments from Gulf of Mexico cold seeps

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.51

Carbon and hydrogen isotope fractionation associated with the aerobic microbial oxidation of methane, ethane, propane and butane

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.51

Anaerobic oxidation of short-chain hydrocarbons by marine sulphate-reducing bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.51

Activity, Distribution, and Diversity of Sulfate Reducers and Other Bacteria in Sediments above Gas Hydrate (Cascadia Margin, Oregon)

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.51

Enhanced sensitivity of DNA- and rRNA-based stable isotope probing by fractionation and quantitative analysis of isopycnic centrifugation gradients

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.51

Degradation of o-xylene and m-xylene by a novel sulfate-reducer belonging to the genus Desulfotomaculum

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.51

Microbial methane oxidation and sulfate reduction at cold seeps of the deep Eastern Mediterranean Sea

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.51

Impact of natural oil and higher hydrocarbons on microbial diversity, distribution, and activity in Gulf of Mexico cold-seep sediments

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.51

Electron acceptor-dependent identification of key anaerobic toluene degraders at a tar-oil-contaminated aquifer by Pyro-SIP.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.51

Anaerobic propane oxidation in marine hydrocarbon seep sediments

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.51

Biodegradation of low-molecular-weight alkanes under mesophilic, sulfate-reducing conditions: metabolic intermediates and community patterns

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.51

Anaerobic degradation of n-hexane in a denitrifying bacterium: further degradation of the initial intermediate (1-methylpentyl)succinate via C-skeleton rearrangement

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.51

DNA-SIP identifies sulfate-reducing Clostridia as important toluene degraders in tar-oil-contaminated aquifer sediment

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.51

Anaerobic degradation of benzene by a marine sulfate-reducing enrichment culture, and cell hybridization of the dominant phylotype.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4184016

Weak coupling between sulfate reduction and the anaerobic oxidation of methane in methane-rich seafloor sediments during ex situ incubation

28 October 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.51

Hydrothermal oil of Guaymas Basin and implications for petroleum formation mechanisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.51

Improved method for isotopic and quantitative analysis of dissolved inorganic carbon in natural water samples

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24722631

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24722631

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Seep oil and gas in gulf of Mexico slope sediment

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24722631

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/ISMEJ.2014.51

1 reference

Dimensions Publication ID

1 August 2017

0 references

1 reference

1 August 2017

1 reference