(Q34311184)

1 August 2017

title

Phaeobacter gallaeciensis genomes from globally opposite locations reveal high similarity of adaptation to surface life (English)

1 reference

1 August 2017

Heiko Liesegang

6

0 references

Staffan Kjelleberg

object named as

Staffan Kjelleberg

8

0 references

Rolf Daniel

object named as

Rolf Daniel

9

0 references

Thorsten Brinkhoff

12

object named as

Thorsten Brinkhoff

1 reference

1 August 2017

7

Antje Wollherr

1 reference

1 August 2017

10

Meinhard Simon

1 reference

1 August 2017

3

Sonja Voget

1 reference

1 August 2017

1

Sebastian Thole

1 reference

1 August 2017

2

Daniela Kalhoefer

1 reference

1 August 2017

11

Torsten Thomas

1 reference

1 August 2017

Martine Berger

4

1 reference

1 August 2017

Tim Engelhardt

5

1 reference

1 August 2017

publication date

21 June 2012

1 reference

1 August 2017

1 reference

1 August 2017

volume

6

1 reference

1 August 2017

issue

12

1 reference

1 August 2017

page(s)

2229-2244

1 reference

https://scigraph.springernature.com/pub.10.1038/ismej.2012.62

1 August 2017

exact match

0 references

cites work

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Draft genome of Phaeobacter gallaeciensis ANG1, a dominant member of the accessory nidamental gland of Euprymna scolopes

6 July 2018

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The Jekyll-and-Hyde chemistry of Phaeobacter gallaeciensis

6 July 2018

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Phylogeny and compatibility: plasmid classification in the genomics era.

6 July 2018

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Studies on the mechanism of ring hydrolysis in phenylacetate degradation: a metabolic branching point

6 July 2018

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6 July 2018

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The rhizobacterial elicitor acetoin induces systemic resistance in Arabidopsis thaliana

6 July 2018

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Siderophore-mediated iron acquisition in Bacillus anthracis and related strains.

6 July 2018

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Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains

6 July 2018

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Phylogenetic characterization and in situ detection of bacterial communities associated with seahorses (Hippocampus guttulatus) in captivity.

6 July 2018

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Identification and biosynthesis of tropone derivatives and sulfur volatiles produced by bacteria of the marine Roseobacter clade

6 July 2018

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Photolysis of iron-siderophore chelates promotes bacterial-algal mutualism

6 July 2018

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Growth phase-dependent global protein and metabolite profiles of Phaeobacter gallaeciensis strain DSM 17395, a member of the marine Roseobacter-clade

6 July 2018

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Bacterial extracellular polysaccharides involved in biofilm formation

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Siderophores of Marinobacter aquaeolei: petrobactin and its sulfonated derivatives

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

IslandViewer: an integrated interface for computational identification and visualization of genomic islands

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

DNAPlotter: circular and linear interactive genome visualization

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Phaeobacter and Ruegeria species of the Roseobacter clade colonize separate niches in a Danish Turbot (Scophthalmus maximus)-rearing farm and antagonize Vibrio anguillarum under different growth conditions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Analysis of the Pseudoalteromonas tunicata genome reveals properties of a surface-associated life style in the marine environment

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

The temperate marine phage PhiHAP-1 of Halomonas aquamarina possesses a linear plasmid-like prophage genome

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Diversity, ecology, and genomics of the Roseobacter clade: a short overview.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Genetic dissection of tropodithietic acid biosynthesis by marine roseobacters

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Ecological genomics of marine Roseobacters

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Biofilm formation by plant-associated bacteria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Importance of widespread gene transfer agent genes in alpha-proteobacteria.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Plasmid-encoded antirestriction protein ArdA can discriminate between type I methyltransferase and complete restriction-modification system.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Interrelations between glycine betaine catabolism and methionine biosynthesis in Sinorhizobium meliloti strain 102F34

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Microbial colonization and competition on the marine alga Ulva australis.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Induction of multiple prophages from a marine bacterium: a genomic approach

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Reclassification of Roseobacter gallaeciensis Ruiz-Ponte et al. 1998 as Phaeobacter gallaeciensis gen. nov., comb. nov., description of Phaeobacter inhibens sp. nov., reclassification of Ruegeria algicola (Lafay et al. 1995) Uchino et al. 1999 ...

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Score-based prediction of genomic islands in prokaryotic genomes using hidden Markov models.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Rhizobial exopolysaccharides: genetic control and symbiotic functions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Ecology, inhibitory activity, and morphogenesis of a marine antagonistic bacterium belonging to the Roseobacter clade.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Expansion of the BioCyc collection of pathway/genome databases to 160 genomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Competitive interactions in mixed-species biofilms containing the marine bacterium Pseudoalteromonas tunicata.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Seasonal incidence of autochthonous antagonistic Roseobacter spp. and Vibrionaceae strains in a turbot larva (Scophthalmus maximus) rearing system

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Mauve: multiple alignment of conserved genomic sequence with rearrangements

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Antibiotic production by a Roseobacter clade-affiliated species from the German Wadden Sea and its antagonistic effects on indigenous isolates

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

A continuum of anionic charge: structures and functions of D-alanyl-teichoic acids in gram-positive bacteria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Biosynthesis of the Thiazole Moiety of Thiamin Pyrophosphate (Vitamin B1)

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Bacterial volatiles promote growth in Arabidopsis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

The ERGO genome analysis and discovery system

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Microbial genome evolution: sources of variability

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Seasonal variation in lysogeny as depicted by prophage induction in Tampa Bay, Florida

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

The Pathway Tools software

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Comparison of the genomes of two Xanthomonas pathogens with differing host specificities

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Bacterial distribution and phylogenetic diversity in the Changjiang estuary before the construction of the Three Gorges Dam.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

The flavoprotein MrsD catalyzes the oxidative decarboxylation reaction involved in formation of the peptidoglycan biosynthesis inhibitor mersacidin

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Behavior of restriction-modification systems as selfish mobile elements and their impact on genome evolution

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

The gene transfer agent of Rhodobacter capsulatus and "constitutive transduction" in prokaryotes.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Key role of teichoic acid net charge in Staphylococcus aureus colonization of artificial surfaces

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Radical SAM, a novel protein superfamily linking unresolved steps in familiar biosynthetic pathways with radical mechanisms: functional characterization using new analysis and information visualization methods

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Ecology and evolution of bacterial microdiversity

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Creatine and creatinine metabolism

6 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

6 July 2018

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Marine viruses and their biogeochemical and ecological effects

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Novel rkp gene clusters of Sinorhizobium meliloti involved in capsular polysaccharide production and invasion of the symbiotic nodule: the rkpK gene encodes a UDP-glucose dehydrogenase.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Roseobacter gallaeciensis sp. nov., a new marine bacterium isolated from rearings and collectors of the scallop Pecten maximus

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

A genomic perspective on protein families

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

The Staden sequence analysis package

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Purification, kinetic properties, and cDNA cloning of mammalian betaine-homocysteine methyltransferase

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

A role for bacteriophages in the evolution and transfer of bacterial virulence determinants

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Cloning and sequence analysis of an EnvCD homologue in Pseudomonas aeruginosa: regulation by iron and possible involvement in the secretion of the siderophore pyoverdine.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Incorporation of D-alanine into lipoteichoic acid and wall teichoic acid in Bacillus subtilis. Identification of genes and regulation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Siroheme and sirohydrochlorin. The basis for a new type of porphyrin-related prosthetic group common to both assimilatory and dissimilatory sulfite reductases

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Universal chemical assay for the detection and determination of siderophores.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Nucleotide sequence and genetic organization of the ferric enterobactin transport system: homology to other peripiasmic binding protein-dependent systems in Escherichia coli

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Siderophore and organic acid production in root nodule bacteria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

The PatB protein of Bacillus subtilis is a C-S-lyase.

6 July 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.62

Phylogenetic characterization of epibiotic bacteria in the accessory nidamental gland and egg capsules of the squid Loligo pealei (Cephalopoda:Loliginidae)

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.62

Marine diatom species harbour distinct bacterial communities.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.62

Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.62

Genome characteristics of a generalist marine bacterial lineage

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.62

Origin and evolution of a novel DnaA-like plasmid replication type in Rhodobacterales

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.62

Low densities of epiphytic bacteria from the marine alga Ulva australis inhibit settlement of fouling organisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.62

YACOP: Enhanced gene prediction obtained by a combination of existing methods.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504968

Antibacterial Activity of Marine Culturable Bacteria Collected from a Global Sampling of Ocean Surface Waters and Surface Swabs of Marine Organisms

28 October 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.62

Bacteria of the Roseobacter Clade Show Potential for Secondary Metabolite Production

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.62

Characterization and analysis of early enzymes for petrobactin biosynthesis in Bacillus anthracis

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22717884

12 December 2020

inferred from PubMed ID database lookup

The Sinorhizobium meliloti ExpE1 protein secreted by a type I secretion system involving ExpD1 and ExpD2 is required for biosynthesis or secretion of the exopolysaccharide galactoglucan

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22717884

12 December 2020

inferred from PubMed ID database lookup

Inhibitory activity of Phaeobacter strains against aquaculture pathogenic bacteria

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22717884

12 December 2020

inferred from PubMed ID database lookup

Thiotropocin biosynthesis. Shikimate origin of a sulfur-containing tropolone derivative

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2012.62

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/ISMEJ.2012.62

1 reference

Dimensions Publication ID

1 August 2017

0 references

1 reference

1 August 2017

1 reference