(Q34439368)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25135956%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

title

H3S28 phosphorylation is a hallmark of the transcriptional response to cellular stress (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25135956%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

0 references

1 reference

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25135956%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Christian Seiser

8

1 reference

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12 March 2020

author name string

Anna Sawicka

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25135956%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Dominik Hartl

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25135956%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Malgorzata Goiser

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25135956%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Oliver Pusch

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25135956%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

Roman R Stocsits

5

1 reference

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12 March 2020

Ido M Tamir

6

1 reference

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12 March 2020

publication date

18 August 2014

1 reference

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12 March 2020

1 reference

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12 March 2020

volume

24

1 reference

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12 March 2020

issue

11

1 reference

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12 March 2020

page(s)

1808-1820

1 reference

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Acetylation of RNA polymerase II regulates growth-factor-induced gene transcription in mammalian cells

12 March 2020

cites work

1 reference

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A stress-activated, p38 mitogen-activated protein kinase-ATF/CREB pathway regulates posttranscriptional, sequence-dependent decay of target RNAs

6 July 2018

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Chromatin: receiver and quarterback for cellular signals

6 July 2018

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Systematic dissection of roles for chromatin regulators in a yeast stress response

6 July 2018

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Histone H3 phosphorylation - a versatile chromatin modification for different occasions.

6 July 2018

1 reference

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In vivo Polycomb kinetics and mitotic chromatin binding distinguish stem cells from differentiated cells

6 July 2018

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Mechanisms establishing TLR4-responsive activation states of inflammatory response genes.

6 July 2018

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The opposing transcriptional functions of Sin3a and c-Myc are required to maintain tissue homeostasis

6 July 2018

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A peek into the complex realm of histone phosphorylation

6 July 2018

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Regulating RNA polymerase pausing and transcription elongation in embryonic stem cells

6 July 2018

1 reference

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Histone code pathway involving H3 S28 phosphorylation and K27 acetylation activates transcription and antagonizes polycomb silencing

6 July 2018

1 reference

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XPB, a subunit of TFIIH, is a target of the natural product triptolide.

6 July 2018

1 reference

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The chromatin signaling pathway: diverse mechanisms of recruitment of histone-modifying enzymes and varied biological outcomes

6 July 2018

1 reference

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Pausing of RNA polymerase II disrupts DNA-specified nucleosome organization to enable precise gene regulation

6 July 2018

1 reference

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Crucial function of histone deacetylase 1 for differentiation of teratomas in mice and humans

6 July 2018

1 reference

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A phosphorylation switch regulates the transcriptional activation of cell cycle regulator p21 by histone deacetylase inhibitors.

6 July 2018

1 reference

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MAPK signalling in cellular metabolism: stress or wellness?

6 July 2018

1 reference

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Polycomb group protein displacement and gene activation through MSK-dependent H3K27me3S28 phosphorylation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Epigenetic regulation of a murine retrotransposon by a dual histone modification mark

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

c-Myc regulates transcriptional pause release

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Promoter chromatin remodeling of immediate-early genes is mediated through H3 phosphorylation at either serine 28 or 10 by the MSK1 multi-protein complex

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Global analysis of short RNAs reveals widespread promoter-proximal stalling and arrest of Pol II in Drosophila

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Searching for SNPs with cloud computing

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Histone crosstalk between H3S10ph and H4K16ac generates a histone code that mediates transcription elongation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Control of inducible gene expression by signal-dependent transcriptional elongation

6 July 2018

1 reference

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A unifying model for the selective regulation of inducible transcription by CpG islands and nucleosome remodeling

6 July 2018

1 reference

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TopHat: discovering splice junctions with RNA-Seq

6 July 2018

1 reference

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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters

6 July 2018

1 reference

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Model-based analysis of ChIP-Seq (MACS)

6 July 2018

1 reference

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Modulation of 14-3-3 interaction with phosphorylated histone H3 by combinatorial modification patterns

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Dynamic regulation of nucleosome positioning in the human genome

6 July 2018

1 reference

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14-3-3 proteins recognize a histone code at histone H3 and are required for transcriptional activation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

RNA polymerase is poised for activation across the genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

A chromatin landmark and transcription initiation at most promoters in human cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Substrate specificity and catalytic efficiency of aldo-keto reductases with phospholipid aldehydes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Prevalence of the initiator over the TATA box in human and yeast genes and identification of DNA motifs enriched in human TATA-less core promoters

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Bioconductor: open software development for computational biology and bioinformatics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

MAP kinases as structural adaptors and enzymatic activators in transcription complexes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Phosphorylation and acetylation of histone H3 at inducible genes: two controversies revisited

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

MAP kinase-mediated phosphoacetylation of histone H3 and inducible gene regulation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

p38 Mitogen-activated protein kinase mediates cell death and p21-activated kinase mediates cell survival during chemotherapeutic drug-induced mitotic arrest

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Histone H3 phosphorylation by IKK-alpha is critical for cytokine-induced gene expression

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

MSK2 and MSK1 mediate the mitogen- and stress-induced phosphorylation of histone H3 and HMG-14

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Histone acetylation and deacetylation in yeast

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

p38 MAPK interacts with actin and modulates filament assembly during skeletal muscle differentiation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Activation of the mouse histone deacetylase 1 gene by cooperative histone phosphorylation and acetylation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

MSK1 and MSK2 are required for the mitogen- and stress-induced phosphorylation of CREB and ATF1 in fibroblasts

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Independent dynamic regulation of histone phosphorylation and acetylation during immediate-early gene induction

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Signaling to chromatin through histone modifications

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Synergistic coupling of histone H3 phosphorylation and acetylation in response to epidermal growth factor stimulation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Acetylation regulates transcription factor activity at multiple levels

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Acetylation of general transcription factors by histone acetyltransferases

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

FGF and stress regulate CREB and ATF-1 via a pathway involving p38 MAP kinase and MAPKAP kinase-2

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

In vivo transcriptional pausing and cap formation on three Drosophila heat shock genes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Rapid histone H3 phosphorylation in response to growth factors, phorbol esters, okadaic acid, and protein synthesis inhibitors

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Primary response genes induced by growth factors and tumor promoters

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4216922

Identification and distinct regulation of yeast TATA box-containing genes

6 July 2018

1 reference

https://api.crossref.org/works/10.1101%2FGR.176255.114

Nucleosomes unfold completely at a transcriptionally active promoter.

21 January 2018

1 reference

https://api.crossref.org/works/10.1101%2FGR.176255.114

Gene expression profiling of multiple histone deacetylase (HDAC) inhibitors: defining a common gene set produced by HDAC inhibition in T24 and MDA carcinoma cell lines

21 January 2018

1 reference

https://api.crossref.org/works/10.1101%2FGR.176255.114

Dynamic distribution of HDAC1 and HDAC2 during mitosis: association with F-actin.

21 January 2018

1 reference

https://api.crossref.org/works/10.1101%2FGR.176255.114

Analysis of protein mixtures from whole-cell extracts by single-run nanoLC-MS/MS using ultralong gradients.

21 January 2018

1 reference

https://api.crossref.org/works/10.1101%2FGR.176255.114

Lineage-specific polycomb targets and de novo DNA methylation define restriction and potential of neuronal progenitors.

21 January 2018

1 reference

https://api.crossref.org/works/10.1101%2FGR.176255.114

p38-Dependent marking of inflammatory genes for increased NF-kappa B recruitment

21 January 2018

1 reference

https://api.crossref.org/works/10.1101%2FGR.176255.114

Nerve growth factor mediates phosphorylation of specific proteins

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25135956

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GR.176255.114

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25135956%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25135956%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

PubMed publication ID

25135956

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25135956%20AND%20SRC:MED&resulttype=core&format=json