Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q34484579)
Watch
English
Limitations and possibilities of low cell number ChIP-seq.
scientific article
In more languages
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMCID
3533509
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23171294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 February 2020
title
Limitations and possibilities of low cell number ChIP-seq
(English)
1 reference
stated in
Europe PubMed Central
PMCID
3533509
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23171294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 February 2020
author
Gregor D Gilfillan
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMCID
3533509
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23171294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 February 2020
Tobias Straub
series ordinal
5
1 reference
stated in
Europe PubMed Central
PMCID
3533509
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23171294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 February 2020
Kristina Gervin
series ordinal
6
1 reference
stated in
Europe PubMed Central
PMCID
3533509
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23171294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 February 2020
Dag Undlien
series ordinal
8
object named as
Dag E Undlien
1 reference
stated in
Europe PubMed Central
PMCID
3533509
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23171294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 February 2020
author name string
Timothy Hughes
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMCID
3533509
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23171294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 February 2020
Ying Sheng
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMCID
3533509
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23171294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 February 2020
Hanne S Hjorthaug
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMCID
3533509
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23171294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 February 2020
Robert Lyle
series ordinal
9
1 reference
stated in
Europe PubMed Central
PMCID
3533509
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23171294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 February 2020
Jennifer R Harris
series ordinal
7
1 reference
stated in
Europe PubMed Central
PMCID
3533509
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23171294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 February 2020
language of work or name
English
0 references
publication date
21 November 2012
1 reference
stated in
Europe PubMed Central
PMCID
3533509
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23171294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 February 2020
published in
BMC Genomics
1 reference
stated in
Europe PubMed Central
PMCID
3533509
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23171294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 February 2020
volume
13
1 reference
stated in
Europe PubMed Central
PMCID
3533509
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23171294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 February 2020
page(s)
645
1 reference
stated in
Europe PubMed Central
PMCID
3533509
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23171294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 February 2020
cites work
An integrated encyclopedia of DNA elements in the human genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Digital RNA sequencing minimizes sequence-dependent bias and amplification noise with optimized single-molecule barcodes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Whole-genome chromatin profiling from limited numbers of cells using nano-ChIP-seq
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Genome-wide epigenetic analysis of human pluripotent stem cells by ChIP and ChIP-Seq
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Single-tube linear DNA amplification (LinDA) for robust ChIP-seq.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
ChIP-chip versus ChIP-seq: lessons for experimental design and data analysis.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Integrative genomics viewer
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
The effect of micrococcal nuclease digestion on nucleosome positioning data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Genome-wide chromatin maps derived from limited numbers of hematopoietic progenitors
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Native chromatin preparation and Illumina/Solexa library construction
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
BEDTools: a flexible suite of utilities for comparing genomic features
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Chromatin profiling by directly sequencing small quantities of immunoprecipitated DNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Mapping accessible chromatin regions using Sono-Seq
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
The Sequence Alignment/Map format and SAMtools
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Fast and accurate short read alignment with Burrows-Wheeler transform
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
A streamlined method for rapid and sensitive chromatin immunoprecipitation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
A module-based analytical strategy to identify novel disease-associated genes shows an inhibitory role for interleukin 7 Receptor in allergic inflammation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Fast genomic muChIP-chip from 1,000 cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Optimization of experimental design parameters for high-throughput chromatin immunoprecipitation studies
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Model-based analysis of ChIP-Seq (MACS)
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
A rapid micro chromatin immunoprecipitation assay (microChIP).
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Analysis of transcription factor interactions in osteoblasts using competitive chromatin immunoprecipitation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Genome-scale ChIP-chip analysis using 10,000 human cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Epigenetic characterization of hematopoietic stem cell differentiation using miniChIP and bisulfite sequencing analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
High-resolution profiling of histone methylations in the human genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Q2ChIP, a quick and quantitative chromatin immunoprecipitation assay, unravels epigenetic dynamics of developmentally regulated genes in human carcinoma cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Epigenetic characterization of the early embryo with a chromatin immunoprecipitation protocol applicable to small cell populations
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Genomic maps and comparative analysis of histone modifications in human and mouse
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Site-specific analysis of histone methylation and acetylation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Immunoprecipitation of native chromatin: NChIP.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
DNA methylation is linked to deacetylation of histone H3, but not H4, on the imprinted genes Snrpn and U2af1-rs1.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Histone H4 acetylation distinguishes coding regions of the human genome from heterochromatin in a differentiation-dependent but transcription-independent manner.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Basic local alignment search tool
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
6 July 2018
Chromatin immunoprecipitation in mouse hippocampal cells and tissues.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
27 October 2018
Native chromatin immunoprecipitation (N-ChIP) and ChIP-Seq of Schistosoma mansoni: Critical experimental parameters.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
27 October 2018
MicroChIP--a rapid micro chromatin immunoprecipitation assay for small cell samples and biopsies
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
27 October 2018
Native chromatin immunoprecipitation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533509
retrieved
27 October 2018
Identifiers
DOI
10.1186/1471-2164-13-645
1 reference
stated in
Europe PubMed Central
PMCID
3533509
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23171294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 February 2020
PMCID
3533509
1 reference
stated in
Europe PubMed Central
PMCID
3533509
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23171294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 February 2020
PubMed ID
23171294
1 reference
stated in
Europe PubMed Central
PMCID
3533509
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23171294%20AND%20SRC:MED&resulttype=core&format=json
retrieved
18 February 2020
ResearchGate publication ID
233744684
0 references
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit