(Q34557250)

English

Reassessment of the Listeria monocytogenes pan-genome reveals dynamic integration hotspots and mobile genetic elements as major components of the accessory genome

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scholarly article

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Europe PubMed Central

3 August 2017

Reassessment of the Listeria monocytogenes pan-genome reveals dynamic integration hotspots and mobile genetic elements as major components of the accessory genome (English)

1 reference

Europe PubMed Central

3 August 2017

Listeria monocytogenes

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Carsten T Kuenne

object named as

Carsten Kuenne

1

0 references

Alexander Goesmann

object named as

Alexander Goesmann

6

0 references

object named as

Rolf Daniel

5

0 references

Trinad Chakraborty

9

object named as

Trinad Chakraborty

1 reference

Europe PubMed Central

3 August 2017

author name string

André Billion

2

1 reference

Europe PubMed Central

3 August 2017

Mobarak Abu Mraheil

3

1 reference

Europe PubMed Central

3 August 2017

Axel Strittmatter

4

1 reference

Europe PubMed Central

3 August 2017

Sukhadeo Barbuddhe

7

1 reference

Europe PubMed Central

3 August 2017

Torsten Hain

8

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Europe PubMed Central

3 August 2017

language of work or name

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publication date

22 January 2013

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Europe PubMed Central

3 August 2017

1 reference

Europe PubMed Central

3 August 2017

14

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Europe PubMed Central

3 August 2017

47

1 reference

Europe PubMed Central

3 August 2017

sRNAdb: a small non-coding RNA database for gram-positive bacteria

1 reference

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7 July 2018

Comparative transcriptomics of pathogenic and non-pathogenic Listeria species

1 reference

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7 July 2018

Comparative genomics and transcriptomics of lineages I, II, and III strains of Listeria monocytogenes

1 reference

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7 July 2018

The Pfam protein families database

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Revival of Seeliger's historical 'Special Listeria Culture Collection'.

1 reference

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Ruminant rhombencephalitis-associated Listeria monocytogenes alleles linked to a multilocus variable-number tandem-repeat analysis complex

1 reference

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Genome sequence of the nonpathogenic Listeria monocytogenes serovar 4a strain M7.

1 reference

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Evolution and classification of the CRISPR-Cas systems

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Design principles of adaptive immune systems

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Fold and Function of the InlB B-repeat

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The intracellular sRNA transcriptome of Listeria monocytogenes during growth in macrophages

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Comparative genome-wide analysis of small RNAs of major Gram-positive pathogens: from identification to application

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A bacterial protein targets the BAHD1 chromatin complex to stimulate type III interferon response

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Variation in Listeria monocytogenes dose responses in relation to subtypes encoding a full-length or truncated internalin A

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Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss

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Probing the pan-genome of Listeria monocytogenes: new insights into intraspecific niche expansion and genomic diversification

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Listeria monocytogenes lineages: Genomics, evolution, ecology, and phenotypic characteristics

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Interference with histidyl-tRNA synthetase by a CRISPR spacer sequence as a factor in the evolution of Pelobacter carbinolicus

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Self-targeting by CRISPR: gene regulation or autoimmunity?

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Antibody targeting the ferritin-like protein controls Listeria infection

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Pyrosequencing-based comparative genome analysis of the nosocomial pathogen Enterococcus faecium and identification of a large transferable pathogenicity island

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High-throughput genome sequencing of two Listeria monocytogenes clinical isolates during a large foodborne outbreak

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The bacterial pathogen Listeria monocytogenes: an emerging model in prokaryotic transcriptomics

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Deep RNA sequencing of L. monocytogenes reveals overlapping and extensive stationary phase and sigma B-dependent transcriptomes, including multiple highly transcribed noncoding RNAs

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Listeriosis: a resurgent foodborne infection

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Listeria rocourtiae sp. nov.

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Galleria mellonella as a model system for studying Listeria pathogenesis

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Efficient oligonucleotide probe selection for pan-genomic tiling arrays

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Listeria marthii sp. nov., isolated from the natural environment, Finger Lakes National Forest

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In vivo transcriptional profiling of Listeria monocytogenes and mutagenesis identify new virulence factors involved in infection

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The Listeria transcriptional landscape from saprophytism to virulence.

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Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths

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Comparative genomics: the bacterial pan-genome

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Immunity to the bacteriocin sublancin 168 Is determined by the SunI (YolF) protein of Bacillus subtilis

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Short-term genome evolution of Listeria monocytogenes in a non-controlled environment

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Lineage specific recombination rates and microevolution in Listeria monocytogenes

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Listeriolysin S, a novel peptide haemolysin associated with a subset of lineage I Listeria monocytogenes

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7 July 2018

A new perspective on Listeria monocytogenes evolution

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Genome-wide analyses reveal lineage specific contributions of positive selection and recombination to the evolution of Listeria monocytogenes

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Identification of a sigma B-dependent small noncoding RNA in Listeria monocytogenes

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Rapid identification and typing of listeria species by matrix-assisted laser desorption ionization-time of flight mass spectrometry

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Glycerol metabolism and PrfA activity in Listeria monocytogenes

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Inhibition of ROCK activity allows InlF-mediated invasion and increased virulence of Listeria monocytogenes

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Internalins: a complex family of leucine-rich repeat-containing proteins in Listeria monocytogenes

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The epidemiology of human listeriosis

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Listeria monocytogenes surface proteins: from genome predictions to function

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PILER-CR: fast and accurate identification of CRISPR repeats

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Listeria monocytogenes: a multifaceted model

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Genome trees and the tree of life

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Listeria pathogenesis and molecular virulence determinants

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Food-related illness and death in the United States

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Genome phylogeny based on gene content

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Identification, cloning, and characterization of the Ima operon, whose gene products are unique to Listeria monocytogenes

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Basic local alignment search tool

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3556495

7 July 2018

Molecular determinants of Listeria monocytogenes pathogenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3556495

7 July 2018

Prophage excision activates Listeria competence genes that promote phagosomal escape and virulence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3556495

27 October 2018

Adaptation of Listeria monocytogenes to oxidative and nitrosative stress in IFN-γ-activated macrophages

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3556495

27 October 2018

Listeria monocytogenes serovar 4a is a possible evolutionary intermediate between L. monocytogenes serovars 1/2a and 4b and L. innocua

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3556495

27 October 2018

Molecular characterization of the arginine deiminase system in Listeria monocytogenes: regulation and role in acid tolerance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3556495

27 October 2018

Contributions of six lineage-specific internalin-like genes to invasion efficiency of Listeria monocytogenes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3556495

27 October 2018

Assessment of phylogenomic and orthology approaches for phylogenetic inference.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3556495

27 October 2018

GECO--linear visualization for comparative genomics.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3556495

27 October 2018

Invasiveness is a variable and heterogeneous phenotype in Listeria monocytogenes serotype strains.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3556495

27 October 2018

Distribution of Internalin Gene Profiles of Listeria monocytogenes Isolates from Different Sources Associated with Phylogenetic Lineages

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3556495

9 December 2018

Listeria monocytogenes internalins are highly diverse and evolved by recombination and positive selection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3556495

9 December 2018

A five-gene stress survival islet (SSI-1) that contributes to the growth of Listeria monocytogenes in suboptimal conditions

1 reference

https://pubmed.ncbi.nlm.nih.gov/23339658

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Novel factor rescues ribosomes trapped on non-stop mRNAs

1 reference

https://pubmed.ncbi.nlm.nih.gov/23339658

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome phylogenetic analysis based on extended gene contents

1 reference

https://pubmed.ncbi.nlm.nih.gov/23339658

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Virulence of Listeria spp.: course of infection in resistant and susceptible mice

1 reference

https://pubmed.ncbi.nlm.nih.gov/23339658

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Two variable lymphocyte receptor genes of the inshore hagfish are located far apart on the same chromosome

1 reference

https://pubmed.ncbi.nlm.nih.gov/23339658

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A spontaneous genomic deletion in Listeria ivanovii identifies LIPI-2, a species-specific pathogenicity island encoding sphingomyelinase and numerous internalins

1 reference

https://pubmed.ncbi.nlm.nih.gov/23339658

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2164-14-47

1 reference

Europe PubMed Central

3 August 2017

1 reference

Europe PubMed Central

3 August 2017

1 reference

Europe PubMed Central

3 August 2017

ResearchGate publication ID

0 references

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