(Q34559675)

3 August 2017

title

DNA methyltransferase 3b preferentially associates with condensed chromatin (English)

1 reference

3 August 2017

2

Keisuke Nimura

1 reference

3 August 2017

Katsunobu Kashiwagi

1

1 reference

3 August 2017

Kiyoe Ura

series ordinal

3

1 reference

3 August 2017

Yasufumi Kaneda

series ordinal

4

1 reference

3 August 2017

language of work or name

English

0 references

publication date

4 October 2010

1 reference

3 August 2017

number of pages

15

1 reference

inferred from page(s)

published in

Nucleic Acids Research

1 reference

3 August 2017

volume

39

1 reference

3 August 2017

issue

3

1 reference

3 August 2017

page(s)

874-888

1 reference

Creative Commons Attribution-NonCommercial 2.5 Generic

3 August 2017

copyright license

start time

7 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3035464/fullTextXML

inferred from PubMed Central ID database lookup

cites work

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7 July 2018

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Structural basis for recognition of H3K4 methylation status by the DNA methyltransferase 3A ATRX-DNMT3-DNMT3L domain

7 July 2018

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Histone H3 N-terminus regulates higher order structure of yeast heterochromatin

7 July 2018

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Selective anchoring of DNA methyltransferases 3A and 3B to nucleosomes containing methylated DNA.

7 July 2018

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7 July 2018

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7 July 2018

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PRMT5-mediated methylation of histone H4R3 recruits DNMT3A, coupling histone and DNA methylation in gene silencing.

7 July 2018

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Chromatin signatures in multipotent human hematopoietic stem cells indicate the fate of bivalent genes during differentiation

7 July 2018

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Double strand breaks can initiate gene silencing and SIRT1-dependent onset of DNA methylation in an exogenous promoter CpG island

7 July 2018

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30 nm chromatin fibre decompaction requires both H4-K16 acetylation and linker histone eviction

7 July 2018

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Nucleosome repeat length and linker histone stoichiometry determine chromatin fiber structure

7 July 2018

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Maternal and zygotic Dnmt1 are necessary and sufficient for the maintenance of DNA methylation imprints during preimplantation development

7 July 2018

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DNA methylation landscapes: provocative insights from epigenomics

7 July 2018

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How chromatin-binding modules interpret histone modifications: lessons from professional pocket pickers

7 July 2018

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The nucleosome surface regulates chromatin compaction and couples it with transcriptional repression

7 July 2018

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Synergistic function of DNA methyltransferases Dnmt3a and Dnmt3b in the methylation of Oct4 and Nanog

7 July 2018

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Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Structure of Dnmt3a bound to Dnmt3L suggests a model for de novo DNA methylation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

NAD+-dependent deacetylation of H4 lysine 16 by class III HDACs

7 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

DNMT3L connects unmethylated lysine 4 of histone H3 to de novo methylation of DNA

7 July 2018

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Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

7 July 2018

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High-resolution profiling of histone methylations in the human genome

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

DNA methylation profiling of human chromosomes 6, 20 and 22

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Histone H4-K16 acetylation controls chromatin structure and protein interactions

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Histone H1 depletion in mammals alters global chromatin structure but causes specific changes in gene regulation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

The Polycomb group protein EZH2 directly controls DNA methylation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Linker histone variants control chromatin dynamics during early embryogenesis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Active chromatin domains are defined by acetylation islands revealed by genome-wide mapping

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

A method for the in vitro reconstitution of a defined "30 nm" chromatin fibre containing stoichiometric amounts of the linker histone

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

DNA methyltransferase 3b regulates nerve growth factor-induced differentiation of PC12 cells by recruiting histone deacetylase 2

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Suppression of histone H1 genes in Arabidopsis results in heritable developmental defects and stochastic changes in DNA methylation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Human SirT1 interacts with histone H1 and promotes formation of facultative heterochromatin

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Meiotic catastrophe and retrotransposon reactivation in male germ cells lacking Dnmt3L

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

DNMT3B interacts with hSNF2H chromatin remodeling enzyme, HDACs 1 and 2, and components of the histone methylation system

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

DNMT3L stimulates the DNA methylation activity of Dnmt3a and Dnmt3b through a direct interaction

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Chromatin targeting of de novo DNA methyltransferases by the PWWP domain

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Suv39h-mediated histone H3 lysine 9 methylation directs DNA methylation to major satellite repeats at pericentric heterochromatin

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Genomic organization and promoter analysis of the Dnmt3b gene

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

A novel Dnmt3a isoform produced from an alternative promoter localizes to euchromatin and its expression correlates with active de novo methylation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Dynamic reprogramming of DNA methylation in the early mouse embryo.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

A histone H3 methyltransferase controls DNA methylation in Neurospora crassa

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Enzymatic properties of de novo-type mouse DNA (cytosine-5) methyltransferases

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Dnmt3a and Dnmt3b are transcriptional repressors that exhibit unique localization properties to heterochromatin

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

DNA methylation in health and disease

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Isolation and initial characterization of a novel zinc finger gene, DNMT3L, on 21q22.3, related to the cytosine-5-methyltransferase 3 gene family

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Quantitative expression of Oct-3/4 defines differentiation, dedifferentiation or self-renewal of ES cells

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Mutations in ATRX, encoding a SWI/SNF-like protein, cause diverse changes in the pattern of DNA methylation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

The language of covalent histone modifications

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Histone H1 is dispensable for methylation-associated gene silencing in Ascobolus immersus and essential for long life span

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

The putative nuclear receptor mediator TIF1alpha is tightly associated with euchromatin

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Nucleosomes, linker DNA, and linker histone form a unique structural motif that directs the higher-order folding and compaction of chromatin

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Cloning and characterization of a family of novel mammalian DNA (cytosine-5) methyltransferases

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Histone acetylation in chromatin structure and transcription

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

RNA-directed de novo methylation of genomic sequences in plants.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

A positive role for nucleosome mobility in the transcriptional activity of chromatin templates: restriction by linker histones.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Regulation of the higher-order structure of chromatin by histones H1 and H5

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Amount and distribution of 5-methylcytosine in human DNA from different types of tissues of cells

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Differentiation-dependent chromatin alterations precede and accompany transcription of immunoglobulin light chain genes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Cloning and sequencing of a cDNA encoding DNA methyltransferase of mouse cells

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Core filaments of the nuclear matrix

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Targeted mutation of the DNA methyltransferase gene results in embryonic lethality

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Involvement of histone H1 in the organization of the nucleosome and of the salt-dependent superstructures of chromatin

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Epigenetic reprogramming in mouse primordial germ cells

7 July 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ870

De novo DNA methylation is dispensable for the initiation and propagation of X chromosome inactivation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ870

Lsh is required for meiotic chromosome synapsis and retrotransposon silencing in female germ cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ870

Trimethylated lysine 9 of histone H3 is a mark for DNA methylation in Neurospora crassa

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ870

Dnmt3a2 targets endogenous Dnmt3L to ES cell chromatin and induces regional DNA methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ870

Alternative chromatin structure at CpG islands

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ870

Reconstitution of chromatin in vitro

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3035464

Demethylation of the zygotic paternal genome

27 October 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ870

New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning

21 January 2018

1 reference

12 December 2020

Linker histones stabilize the intrinsic salt-dependent folding of nucleosomal arrays: mechanistic ramifications for higher-order chromatin folding

1 reference

12 December 2020

H2A.Z alters the nucleosome surface to promote HP1alpha-mediated chromatin fiber folding

1 reference

12 December 2020

Distinct DNA methylation activity of Dnmt3a and Dnmt3b towards naked and nucleosomal DNA

1 reference

12 December 2020

Mitochondria and the death of oocytes

1 reference

12 December 2020

Chromatin Fiber Folding: Requirement for the Histone H4 N-terminal Tail

1 reference

12 December 2020

Electrophoretic analyses of nucleosomes and other protein-DNA complexes

1 reference

12 December 2020

Reversible oligonucleosome self-association: dependence on divalent cations and core histone tail domains

1 reference

12 December 2020

Cloning and sequencing of a cDNA encoding DNA methyltransferase of mouse cells. The carboxyl-terminal domain of the mammalian enzymes is related to bacterial restriction methyltransferases

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKQ870

1 reference

3 August 2017

1 reference

3 August 2017

1 reference