(Q34867791)

5 August 2017

title

Discrimination of native protein structures using atom-atom contact scoring (English)

1 reference

5 August 2017

Brendan J McConkey

1

1 reference

5 August 2017

Vladimir Sobolev

series ordinal

2

1 reference

5 August 2017

Marvin Edelman

series ordinal

3

1 reference

5 August 2017

language of work or name

English

0 references

publication date

11 March 2003

1 reference

Proceedings of the National Academy of Sciences of the United States of America

5 August 2017

published in

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5 August 2017

volume

100

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5 August 2017

issue

6

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5 August 2017

page(s)

3215-3220

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Processing and evaluation of predictions in CASP4

5 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=152272

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8 July 2018

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A distance-dependent atomic knowledge-based potential for improved protein structure selection.

8 July 2018

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Ab initio protein structure prediction: progress and prospects.

8 July 2018

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8 July 2018

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Discrimination of near-native protein structures from misfolded models by empirical free energy functions.

8 July 2018

1 reference

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Ab initio construction of protein tertiary structures using a hierarchical approach

8 July 2018

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8 July 2018

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8 July 2018

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Sustained performance of knowledge-based potentials in fold recognition.

8 July 2018

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Discrimination of the native from misfolded protein models with an energy function including implicit solvation

8 July 2018

1 reference

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Pair potentials for protein folding: choice of reference states and sensitivity of predicted native states to variations in the interaction schemes

8 July 2018

1 reference

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Discrimination between native and intentionally misfolded conformations of proteins: ES/IS, a new method for calculating conformational free energy that uses both dynamics simulations with an explicit solvent and an implicit solvent continuum model.

8 July 2018

1 reference

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An all-atom distance-dependent conditional probability discriminatory function for protein structure prediction

8 July 2018

1 reference

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8 July 2018

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Structural basis for the binding of a globular antifreeze protein to ice

8 July 2018

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Energy functions that discriminate X-ray and near native folds from well-constructed decoys

8 July 2018

1 reference

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Enlarged representative set of protein structures

8 July 2018

1 reference

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The interpretation of protein structures: Estimation of static accessibility

8 July 2018

1 reference

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Solvation energy in protein folding and binding

8 July 2018

1 reference

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Evaluation of protein models by atomic solvation preference.

8 July 2018

1 reference

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Protein folding from 1961 to 1982.

8 July 2018

1 reference

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Residue-residue potentials with a favorable contact pair term and an unfavorable high packing density term, for simulation and threading.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0535768100

Quantification of protein surfaces, volumes and atom-atom contacts using a constrained Voronoi procedure.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0535768100

Identifying native-like protein structures using physics-based potentials

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=152272

Novel knowledge-based mean force potential at atomic level

26 October 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0535768100

Distance-dependent, pair potential for protein folding: results from linear optimization

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0535768100

Improved recognition of native-like protein structures using a combination of sequence-dependent and sequence-independent features of proteins

21 January 2018

2 references

https://api.crossref.org/works/10.1073%2FPNAS.0535768100

21 January 2018

https://pubmed.ncbi.nlm.nih.gov/12631702

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Discrimination of near-native protein structures from misfolded models by empirical free energy functions

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0535768100

21 January 2018

Identifiers

DOI

10.1073/PNAS.0535768100

1 reference

5 August 2017

0 references

1 reference

5 August 2017

1 reference