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COBRApy: COnstraints-Based Reconstruction and Analysis for Python
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Europe PubMed Central
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3751080
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23927696%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 March 2020
title
COBRApy: COnstraints-Based Reconstruction and Analysis for Python
(English)
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Europe PubMed Central
PMC publication ID
3751080
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23927696%20AND%20SRC:MED&resulttype=core&format=json
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7 March 2020
main subject
Python
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author
Ali Ebrahim
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1
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Europe PubMed Central
PMC publication ID
3751080
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23927696%20AND%20SRC:MED&resulttype=core&format=json
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7 March 2020
Joshua A. Lerman
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2
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Europe PubMed Central
PMC publication ID
3751080
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23927696%20AND%20SRC:MED&resulttype=core&format=json
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7 March 2020
Bernhard Palsson
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Bernhard O Palsson
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Europe PubMed Central
PMC publication ID
3751080
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7 March 2020
author name string
Daniel R Hyduke
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4
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PMC publication ID
3751080
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23927696%20AND%20SRC:MED&resulttype=core&format=json
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7 March 2020
publication date
8 August 2013
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Europe PubMed Central
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3751080
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7 March 2020
published in
BMC Systems Biology
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Europe PubMed Central
PMC publication ID
3751080
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23927696%20AND%20SRC:MED&resulttype=core&format=json
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7 March 2020
volume
7
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PMC publication ID
3751080
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7 March 2020
page(s)
74
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3751080
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7 March 2020
describes a project that uses
Python
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Analysis of omics data with genome-scale models of metabolism
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8 July 2018
In silico method for modelling metabolism and gene product expression at genome scale
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8 July 2018
Model-driven multi-omic data analysis elucidates metabolic immunomodulators of macrophage activation
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A comprehensive genome-scale reconstruction of Escherichia coli metabolism--2011.
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8 July 2018
Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox v2.0
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8 July 2018
Haem oxygenase is synthetically lethal with the tumour suppressor fumarate hydratase
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8 July 2018
Elimination of thermodynamically infeasible loops in steady-state metabolic models
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FASIMU: flexible software for flux-balance computation series in large metabolic networks
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A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2
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Trimming of mammalian transcriptional networks using network component analysis
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BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models
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What is flux balance analysis?
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Towards genome-scale signalling network reconstructions
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Genome-scale reconstruction of Escherichia coli's transcriptional and translational machinery: a knowledge base, its mathematical formulation, and its functional characterization
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LibSBML: an API library for SBML.
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An application programming interface for CellNetAnalyzer
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Stoichiometric model of Escherichia coli metabolism: incorporation of growth-rate dependent biomass composition and mechanistic energy requirements
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Identifiers
DOI
10.1186/1752-0509-7-74
1 reference
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Europe PubMed Central
PMC publication ID
3751080
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23927696%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 March 2020
DBLP publication ID
journals/bmcsb/EbrahimLPH13
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DBLP Dataset 2021-01-02
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28 January 2021
Dimensions Publication ID
1004574459
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PMC publication ID
3751080
1 reference
stated in
Europe PubMed Central
PMC publication ID
3751080
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23927696%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 March 2020
PubMed publication ID
23927696
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Europe PubMed Central
PMC publication ID
3751080
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23927696%20AND%20SRC:MED&resulttype=core&format=json
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7 March 2020
ResearchGate publication ID
255713594
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