(Q35085683)

6 August 2017

title

Genome characteristics reveal the impact of lichenization on lichen-forming fungus Endocarpon pusillum Hedwig (Verrucariales, Ascomycota). (English)

1 reference

6 August 2017

0 references

Endocarpon pusillum

1 reference

Yan-Yan Wang

1

1 reference

6 August 2017

Bin Liu

2

1 reference

6 August 2017

Xin-Yu Zhang

3

1 reference

6 August 2017

Qi-Ming Zhou

4

1 reference

6 August 2017

Tao Zhang

5

1 reference

6 August 2017

Hui Li

6

1 reference

6 August 2017

Yu-Fei Yu

7

1 reference

6 August 2017

Xiao-Ling Zhang

8

1 reference

6 August 2017

Xi-Yan Hao

9

1 reference

6 August 2017

Meng Wang

10

1 reference

6 August 2017

Lei Wang

11

1 reference

6 August 2017

Jiang-Chun Wei

12

1 reference

6 August 2017

language of work or name

English

0 references

publication date

17 January 2014

1 reference

6 August 2017

1 reference

6 August 2017

volume

15

1 reference

6 August 2017

page(s)

34

1 reference

SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler

6 August 2017

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1 reference

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High-throughput genome sequencing of lichenizing fungi to assess gene loss in the ammonium transporter/ammonia permease gene family

8 July 2018

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LEC-2, a highly variable lectin in the lichen Peltigera membranacea

8 July 2018

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Characterization of a transcriptome from a non-model organism, Cladonia rangiferina, the grey reindeer lichen, using high-throughput next generation sequencing and EST sequence data

8 July 2018

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A new reducing polyketide synthase gene from the lichen-forming fungus Cladonia metacorallifera

8 July 2018

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A versatile monosaccharide transporter that operates in the arbuscular mycorrhizal fungus Glomus sp is crucial for the symbiotic relationship with plants

8 July 2018

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Isolation and characterization of a reducing polyketide synthase gene from the lichen-forming fungus Usnea longissima

8 July 2018

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Multiple horizontal gene transfers of ammonium transporters/ammonia permeases from prokaryotes to eukaryotes: toward a new functional and evolutionary classification

8 July 2018

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Algal switching among lichen symbioses.

8 July 2018

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Survival analyses of symbionts isolated from Endocarpon pusillum Hedwig to desiccation and starvation stress

8 July 2018

1 reference

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Fungal and algal gene expression in early developmental stages of lichen-symbiosis

8 July 2018

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The complex interactions between host immunity and non-biotrophic fungal pathogens of wheat leaves.

8 July 2018

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8 July 2018

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A novel high-affinity sucrose transporter is required for virulence of the plant pathogen Ustilago maydis

8 July 2018

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ELM: the status of the 2010 eukaryotic linear motif resource

8 July 2018

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InParanoid 7: new algorithms and tools for eukaryotic orthology analysis

8 July 2018

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Trehalose metabolism: from osmoprotection to signaling

8 July 2018

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Emerging concepts in effector biology of plant-associated organisms.

8 July 2018

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Gene prediction in novel fungal genomes using an ab initio algorithm with unsupervised training

8 July 2018

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Improvement of drought tolerance and grain yield in common bean by overexpressing trehalose-6-phosphate synthase in rhizobia.

8 July 2018

1 reference

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Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments

8 July 2018

1 reference

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Scanning electron microscope study of early lichen synthesis

8 July 2018

1 reference

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RNAmmer: consistent and rapid annotation of ribosomal RNA genes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Pseudogene.org: a comprehensive database and comparison platform for pseudogene annotation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Antibiotic Activity of Lichens

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

The lichen-forming ascomycete Evernia mesomorpha associates with multiple genotypes of Trebouxia jamesii

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

TreeFam: a curated database of phylogenetic trees of animal gene families

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Comparative analysis of programmed cell death pathways in filamentous fungi

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

AUGUSTUS: a web server for gene prediction in eukaryotes that allows user-defined constraints

8 July 2018

1 reference

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The natural history of group I introns

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Rfam: annotating non-coding RNAs in complete genomes

8 July 2018

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The FunCat, a functional annotation scheme for systematic classification of proteins from whole genomes

8 July 2018

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The KEGG resource for deciphering the genome

8 July 2018

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Genes for magnesium transport

8 July 2018

1 reference

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The methylated component of the Neurospora crassa genome

8 July 2018

1 reference

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Fatal attraction: nonself recognition and heterokaryon incompatibility in filamentous fungi

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

r8s: inferring absolute rates of molecular evolution and divergence times in the absence of a molecular clock

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Structure, properties and regulation of magnesium transport proteins

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Large Mg(2+)-dependent currents are associated with the increased expression of ALR1 in Saccharomyces cerevisiae

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

An efficient algorithm for large-scale detection of protein families

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

InterProScan--an integration platform for the signature-recognition methods in InterPro

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Major fungal lineages are derived from lichen symbiotic ancestors

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

The role of haustoria in sugar supply during infection of broad bean by the rust fungus Uromyces fabae

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Vegetative incompatibility in filamentous fungi: Podospora and Neurospora provide some clues

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

The genetics of hyphal fusion and vegetative incompatibility in filamentous ascomycete fungi

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Molecular genetics of heterokaryon incompatibility in filamentous ascomycetes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Molecular mechanisms that confer antibacterial drug resistance

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Gene ontology: tool for the unification of biology

8 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

A methylated Neurospora 5S rRNA pseudogene contains a transposable element inactivated by repeat-induced point mutation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Phylogenetic evidence for horizontal transmission of group I introns in the nuclear ribosomal DNA of mushroom-forming fungi

8 July 2018

1 reference

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Tetracyclines: antibiotic action, uptake, and resistance mechanisms

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Trehalose-6-phosphate, a new regulator of yeast glycolysis that inhibits hexokinases.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Sequence and topology of the CorA magnesium transport systems of Salmonella typhimurium and Escherichia coli. Identification of a new class of transport protein

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Galectins. Structure and function of a large family of animal lectins

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Inactivation of the Podospora anserina vegetative incompatibility locus het-c, whose product resembles a glycolipid transfer protein, drastically impairs ascospore production

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Multiple origins of lichen symbioses in fungi suggested by SSU rDNA phylogeny.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Positions of multiple insertions in SSU rDNA of lichen-forming fungi

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Phylogeny of Discomycetes and early radiations of the apothecial Ascomycotina inferred from SSU rDNA sequence data

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Carbohydrate movement from autotrophs to heterotrophs in parasitic and mutualistic symbiosis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

G proteins: transducers of receptor-generated signals

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Lectins as cell recognition molecules

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Repeat-induced G-C to A-T mutations in Neurospora

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Reactivity of lichen lectins with blood typed canine erythrocytes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Effects of magnesium and chloride ions on light-induced electron transport in membrane fragments from a blue-green alga

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

RIPCAL: a tool for alignment-based analysis of repeat-induced point mutations in fungal genomic sequences

8 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-34

Insights from the first putative biosynthetic gene cluster for a lichen depside and depsidone

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-34

Vertical evolution and intragenic spread of lichen-fungal group I introns.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-34

Mrt, a gene unique to fungi, encodes an oligosaccharide transporter and facilitates rhizosphere competency in Metarhizium robertsii

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-34

Molecular and functional characterization of a fructose specific transporter from the gray mold fungus Botrytis cinerea.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-34

Characterization of a carbohydrate transporter from symbiotic glomeromycotan fungi.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-34

Localization of GDP-mannose transporter in the Golgi requires retrieval to the endoplasmic reticulum depending on its cytoplasmic tail and coatomer

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-34

A Lichen Lectin Specifically Binds to the alpha-1,4-Polygalactoside Moiety of Urease Located in the Cell Wall of Homologous Algae

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-34

Large and linked in scientific publishing

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-34

Fungi evolution revisited: application of the penalized likelihood method to a Bayesian fungal phylogeny provides a new perspective on phylogenetic relationships and divergence dates of Ascomycota groups

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-34

BadiRate: estimating family turnover rates by likelihood-based methods.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-34

Characterization of IDI-4, a bZIP transcription factor inducing autophagy and cell death in the fungus Podospora anserina.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-34

Mitochondrial genomes from the lichenized fungi Peltigera membranacea and Peltigera malacea: features and phylogeny

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

The cell recognition model in chlorolichens involving a fungal lectin binding to an algal ligand can be extended to cyanolichens

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Organic and inorganic nitrogen uptake in lichens

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3897900

Large Mg2+-dependent currents are associated with the increased expression ofALR1inSaccharomyces cerevisiae

27 September 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-34

Orthology, paralogy and proposed classification for paralog subtypes

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-34

Hexose uptake in the plant symbiotic ascomycete Tuber borchii Vittadini: biochemical features and expression pattern of the transporter TBHXT1

21 January 2018

1 reference

12 December 2020

Dissociation and horizontal transmission of codispersing lichen symbionts in the genus Lepraria (Lecanorales: Stereocaulaceae)

1 reference

12 December 2020

A secreted effector protein of Laccaria bicolor is required for symbiosis development

1 reference

12 December 2020

A Secreted Fungal Effector of Glomus intraradices Promotes Symbiotic Biotrophy

1 reference

12 December 2020

Magnesium deficiency results in damage of nitrogen and carbon cross-talk of maize and improvement by cerium addition

1 reference

12 December 2020

Relationship between carbohydrate movement and the symbiosis in lichens with green algae

1 reference

12 December 2020

Fungal melanins as a sun screen for symbiotic green algae in the lichen Lobaria pulmonaria

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-15-34

1 reference

Dimensions Publication ID

6 August 2017

0 references

1 reference

6 August 2017

1 reference