(Q35530102)

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A gene-by-gene population genomics platform: de novo assembly, annotation and genealogical analysis of 108 representative Neisseria meningitidis genomes

scientific article published on 18 December 2014

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Europe PubMed Central

PubMed publication ID

8 August 2017

A gene-by-gene population genomics platform: de novo assembly, annotation and genealogical analysis of 108 representative Neisseria meningitidis genomes (English)

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

Neisseria meningitidis

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based on heuristic

inferred from title

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5

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Martin C J Maiden

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Europe PubMed Central

PubMed publication ID

8 August 2017

object named as

Keith A Jolley

3

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Julian Parkhill

4

object named as

Julian Parkhill

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

Holly B Bratcher

object named as

Holly B Bratcher

1

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ORCID Public Data File 2021

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Craig Corton

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Europe PubMed Central

PubMed publication ID

8 August 2017

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publication date

18 December 2014

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Europe PubMed Central

PubMed publication ID

8 August 2017

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Europe PubMed Central

PubMed publication ID

8 August 2017

15

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

1138

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

Using multilocus sequence typing to study bacterial variation: prospects in the genomic era.

1 reference

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Neisseria adhesin A variation and revised nomenclature scheme

1 reference

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12 July 2018

Implications of differential age distribution of disease-associated meningococcal lineages for vaccine development

1 reference

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Rapid bacterial whole-genome sequencing to enhance diagnostic and public health microbiology

1 reference

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Description and nomenclature of Neisseria meningitidis capsule locus

1 reference

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Persistence of hyperinvasive meningococcal strain types during global spread as recorded in the PubMLST database

1 reference

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High-throughput bacterial genome sequencing: an embarrassment of choice, a world of opportunity.

1 reference

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Evolutionary and genomic insights into meningococcal biology

1 reference

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Resolution of a meningococcal disease outbreak from whole-genome sequence data with rapid Web-based analysis methods

1 reference

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SEQuel: improving the accuracy of genome assemblies

1 reference

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Whole-genome sequences of Bacillus subtilis and close relatives

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Summarizing and correcting the GC content bias in high-throughput sequencing

1 reference

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1 reference

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1 reference

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MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

1 reference

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12 July 2018

Virulence evolution of the human pathogen Neisseria meningitidis by recombination in the core and accessory genome

1 reference

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Assessing the benefits of using mate-pairs to resolve repeats in de novo short-read prokaryotic assemblies

1 reference

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Neisseria meningitidis is structured in clades associated with restriction modification systems that modulate homologous recombination

1 reference

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Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries

1 reference

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BIGSdb: Scalable analysis of bacterial genome variation at the population level.

1 reference

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12 July 2018

Independent evolution of the core and accessory gene sets in the genus Neisseria: insights gained from the genome of Neisseria lactamica isolate 020-06.

1 reference

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12 July 2018

Complete genome sequence of Corynebacterium pseudotuberculosis I19, a strain isolated from a cow in Israel with bovine mastitis

1 reference

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12 July 2018

Using the Velvet de novo assembler for short-read sequencing technologies

1 reference

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12 July 2018

De novo assembly of short sequence reads

1 reference

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12 July 2018

Comparative genome biology of a serogroup B carriage and disease strain supports a polygenic nature of meningococcal virulence

1 reference

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12 July 2018

Genome sequencing reveals widespread virulence gene exchange among human Neisseria species

1 reference

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12 July 2018

De Novo assembly of the complete genome of an enhanced electricity-producing variant of Geobacter sulfurreducens using only short reads

1 reference

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Whole genome assembly of a natto production strain Bacillus subtilis natto from very short read data

1 reference

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12 July 2018

Tablet--next generation sequence assembly visualization

1 reference

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12 July 2018

Sense from sequence reads: methods for alignment and assembly

1 reference

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12 July 2018

Genomics. Genome project standards in a new era of sequencing

1 reference

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Variation of the factor H-binding protein of Neisseria meningitidis

1 reference

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Whole genome amplification and de novo assembly of single bacterial cells

1 reference

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12 July 2018

Genealogical typing of Neisseria meningitidis.

1 reference

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12 July 2018

Improved protocols for the illumina genome analyzer sequencing system

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12 July 2018

Meningococcal carriage and disease--population biology and evolution

1 reference

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12 July 2018

Amplification-free Illumina sequencing-library preparation facilitates improved mapping and assembly of (G+C)-biased genomes

1 reference

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12 July 2018

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

1 reference

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12 July 2018

Association of a bacteriophage with meningococcal disease in young adults.

1 reference

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12 July 2018

A large genome center's improvements to the Illumina sequencing system

1 reference

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Substantial biases in ultra-short read data sets from high-throughput DNA sequencing

1 reference

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1 reference

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12 July 2018

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1 reference

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1 reference

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12 July 2018

Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis

1 reference

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12 July 2018

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1 reference

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12 July 2018

Multilocus sequence typing for global surveillance of meningococcal disease.

1 reference

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12 July 2018

Inference of bacterial microevolution using multilocus sequence data

1 reference

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The microbial pan-genome

1 reference

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Distribution of surface protein variants among hyperinvasive meningococci: implications for vaccine design.

1 reference

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Neisseria meningitidis: an overview of the carriage state

1 reference

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PorA variable regions of Neisseria meningitidis

1 reference

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1 reference

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Differential distribution of novel restriction-modification systems in clonal lineages of Neisseria meningitidis

1 reference

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1 reference

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1 reference

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Clonal population structure of Neisseria meningitidis serogroup A isolated from epidemics and pandemics between 1915 and 1983.

1 reference

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21 January 2018

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7 December 2018

Identifiers

10.1186/1471-2164-15-1138

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

Dimensions Publication ID

0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

ResearchGate publication ID

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