(Q35569634)

8 August 2017

title

Early-life establishment of the swine gut microbiome and impact on host phenotypes (English)

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8 August 2017

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4

Florence Levenez

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8 August 2017

10

Joël Doré

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8 August 2017

Jordi Estellé

3

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Patricia Lepage

object named as

Patricia Lepage

12

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Claire Rogel-Gaillard

object named as

Claire Rogel-Gaillard

11

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author name string

Núria Mach

1

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8 August 2017

Mustapha Berri

2

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8 August 2017

Gaëtan Lemonnier

5

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8 August 2017

Catherine Denis

6

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8 August 2017

Jean-Jacques Leplat

7

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8 August 2017

Claire Chevaleyre

8

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8 August 2017

Yvon Billon

9

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8 August 2017

language of work or name

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6 May 2015

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Environmental Microbiology Reports

8 August 2017

published in

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8 August 2017

volume

7

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8 August 2017

issue

3

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8 August 2017

page(s)

554-569

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Enterotypes of the human gut microbiome

8 August 2017

cites work

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Profiling the gastrointestinal microbiota in response to Salmonella: low versus high Salmonella shedding in the natural porcine host.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Controlling the false discovery rate in behavior genetics research

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

High-throughput sequence-based analysis of the intestinal microbiota of weanling pigs fed genetically modified MON810 maize expressing Bacillus thuringiensis Cry1Ab (Bt maize) for 31 days.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

QIIME allows analysis of high-throughput community sequencing data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Intestinal microbiota in metabolic diseases: from bacterial community structure and functions to species of pathophysiological relevance

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Random forests for classification in ecology.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Transfer of gut microbiota from lean and obese mice to antibiotic-treated mice

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Identification and quantitation of mucosal and faecal desulfovibrios using real time polymerase chain reaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Plant cell wall breakdown by anaerobic microorganisms from the Mammalian digestive tract.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Real-time PCR quantification of the predominant bacterial divisions in the distal gut of Meishan and Landrace pigs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Inflammation-associated enterotypes, host genotype, cage and inter-individual effects drive gut microbiota variation in common laboratory mice

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

High-fat diet determines the composition of the murine gut microbiome independently of obesity

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Impact of chicory inclusion in a cereal-based diet on digestibility, organ size and faecal microbiota in growing pigs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Vertical mother-neonate transfer of maternal gut bacteria via breastfeeding

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Energy-balance studies reveal associations between gut microbes, caloric load, and nutrient absorption in humans

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Longitudinal investigation of the age-related bacterial diversity in the feces of commercial pigs

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Microbial shifts in the swine distal gut in response to the treatment with antimicrobial growth promoter, tylosin

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Rethinking "enterotypes".

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Post-natal development of the porcine microbiota composition and activities

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Nutritional management of gut health in pigs around weaning

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

integrOmics: an R package to unravel relationships between two omics datasets

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Sparse canonical methods for biological data integration: application to a cross-platform study.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Sparse PLS discriminant analysis: biologically relevant feature selection and graphical displays for multiclass problems

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Richness of human gut microbiome correlates with metabolic markers

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Biodiversity of the mucosa-associated microbiota is stable along the distal digestive tract in healthy individuals and patients with IBD.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Microbial composition and in vitro fermentation patterns of human milk oligosaccharides and prebiotics differ between formula-fed and sow-reared piglets

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

In-feed antibiotic effects on the swine intestinal microbiome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

phyloseq: an R package for reproducible interactive analysis and graphics of microbiome census data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Nutritional basis for colonization resistance by human commensal Escherichia coli strains HS and Nissle 1917 against E. coli O157:H7 in the mouse intestine

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Mucosa-associated bacterial microbiome of the gastrointestinal tract of weaned pigs and dynamics linked to dietary calcium-phosphorus

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Bacteroides in the infant gut consume milk oligosaccharides via mucus-utilization pathways

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Host-gut microbiota metabolic interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Effect of dietary protein level on growth performance, indicators of enteric health, and gastrointestinal microbial ecology of weaned pigs induced with postweaning colibacillosis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Immunoglobulin A coating identifies colitogenic bacteria in inflammatory bowel disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Development of the human infant intestinal microbiota

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Differential abundance analysis for microbial marker-gene surveys

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Changes in the gut microbiota of cloned and non-cloned control pigs during development of obesity: gut microbiota during development of obesity in cloned pigs

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Homogenization of regional river dynamics by dams and global biodiversity implications

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Gut microbial gene expression in mother-fed and formula-fed piglets

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

FastTree 2--approximately maximum-likelihood trees for large alignments

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Metabolic niche of a prominent sulfate-reducing human gut bacterium

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

A scaling normalization method for differential expression analysis of RNA-seq data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Stabilization of the murine gut microbiome following weaning

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Establishment of normal gut microbiota is compromised under excessive hygiene conditions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Early-life environmental variation affects intestinal microbiota and immune development in new-born piglets

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Prevotella, a new genus to include Bacteroides melaninogenicus and related species formerly classified in the genus Bacteroides

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Unravelling the effects of the environment and host genotype on the gut microbiome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

IgA synthesis: a form of functional immune adaptation extending beyond gut.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Structural determination and daily variations of porcine milk oligosaccharides

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

The immediate environment during postnatal development has long-term impact on gut community structure in pigs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Linking long-term dietary patterns with gut microbial enterotypes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Influence of the amount of dietary fiber on the available energy from hindgut fermentation in growing pigs: Use of cannulated pigs and in vitro fermentation1

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

Differences in transcriptomic profile and IgA repertoire between jejunal and ileal Peyer's patches

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1758-2229.12285

21 January 2018

Identifiers

DOI

10.1111/1758-2229.12285

1 reference

8 August 2017

1 reference