(Q35651792)

9 August 2017

title

Evolutionary analysis of the female-specific avian W chromosome (English)

1 reference

9 August 2017

6

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9 August 2017

Linnéa Smeds

1

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Severin Uebbing

Severin Uebbing

4

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László Zsolt Garamszegi

Laszlo Z Garamszegi

9

0 references

Alexander Nater

Alexander Nater

7

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Hans Ellegren

17

Hans Ellegren

1 reference

9 August 2017

2

Vera Warmuth

1 reference

9 August 2017

5

Reto Burri

1 reference

9 August 2017

10

Silje Hogner

1 reference

9 August 2017

12

Anna Qvarnström

1 reference

9 August 2017

14

Stein-Are Sæther

1 reference

9 August 2017

3

Paulina Bolivar

1 reference

9 August 2017

Stanislav Bureš

8

1 reference

9 August 2017

Juan Moreno

11

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9 August 2017

Milan Ružić

13

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9 August 2017

Glenn-Peter Sætre

15

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9 August 2017

Janos Török

16

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9 August 2017

language of work or name

English

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publication date

4 June 2015

1 reference

9 August 2017

published in

Nature Communications

1 reference

9 August 2017

volume

6

1 reference

9 August 2017

page(s)

7330

1 reference

Creative Commons Attribution 4.0 International

9 August 2017

copyright license

start time

4 June 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

exact match

https://scigraph.springernature.com/pub.10.1038/ncomms8330

0 references

cites work

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27 July 2018

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Independent stratum formation on the avian sex chromosomes reveals inter-chromosomal gene conversion and predominance of purifying selection on the W chromosome

27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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27 July 2018

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RNA sequencing reveals sexually dimorphic gene expression before gonadal differentiation in chicken and allows comprehensive annotation of the W-chromosome

27 July 2018

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Trade-off between selection for dosage compensation and masculinization on the avian Z chromosome

27 July 2018

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Sex-specific adaptation drives early sex chromosome evolution in Drosophila

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Sex-chromosome evolution: recent progress and the influence of male and female heterogamety

27 July 2018

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PiggyBac-ing on a primate genome: novel elements, recent activity and horizontal transfer

27 July 2018

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Comparative genomics based on massive parallel transcriptome sequencing reveals patterns of substitution and selection across 10 bird species

27 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

Ecology and genetics of speciation in Ficedula flycatchers

27 July 2018

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Sex chromosomes and sexual selection in poeciliid fishes.

27 July 2018

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27 July 2018

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27 July 2018

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Faced with inequality: chicken do not have a general dosage compensation of sex-linked genes

27 July 2018

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27 July 2018

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27 July 2018

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Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

27 July 2018

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Evolutionary strata on the chicken Z chromosome: implications for sex chromosome evolution

27 July 2018

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27 July 2018

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The human Y chromosome: an evolutionary marker comes of age

27 July 2018

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The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes

27 July 2018

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Origin and evolution of the Drosophila Y chromosome

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

The degeneration of Y chromosomes

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

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27 July 2018

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27 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

Male-driven evolution of DNA sequences in birds

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny

27 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

Sequencing the mouse Y chromosome reveals convergent gene acquisition and amplification on both sex chromosomes

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

A high-density linkage map enables a second-generation collared flycatcher genome assembly and reveals the patterns of avian recombination rate variation and chromosomal evolution

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

Origins and functional evolution of Y chromosomes across mammals

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

Old but not (so) degenerated--slow evolution of largely homomorphic sex chromosomes in ratites.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

The genomic landscape of species divergence in Ficedula flycatchers

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

Strict evolutionary conservation followed rapid gene loss on human and rhesus Y chromosomes

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

Full-length transcriptome assembly from RNA-Seq data without a reference genome

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

A framework for variation discovery and genotyping using next-generation DNA sequencing data

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

DendroPy: a Python library for phylogenetic computing

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

Revealing the hidden complexities of mtDNA inheritance

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

The chicken (Gallus gallus) Z chromosome contains at least three nonlinear evolutionary strata

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

Low mitochondrial variability in birds may indicate Hill-Robertson effects on the W chromosome.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

Dosage compensation is less effective in birds than in mammals

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

Fast accumulation of nonsynonymous mutations on the female-specific W chromosome in birds.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

Gene conversion drives the evolution of HINTW, an ampliconic gene on the female-specific avian W chromosome.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

Genome-wide midrange transcription profiles reveal expression level relationships in human tissue specification.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

Evolutionary genetics. Clonal inheritance of avian mitochondrial DNA.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

Wpkci, encoding an altered form of PKCI, is conserved widely on the avian W chromosome and expressed in early female embryos: implication of its role in female sex determination

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4468903

Cutadapt removes adapter sequences from high-throughput sequencing reads

25 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNCOMMS8330

High-resolution cytological localization of the XhoI and EcoRI repeat sequences in the pachytene ZW bivalent of the chicken

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26040272

12 December 2020

inferred from PubMed ID database lookup

Mitochondria and the W chromosome: low variability on the W chromosome in birds is more likely to indicate selection on mitochondrial genes

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26040272

12 December 2020

inferred from PubMed ID database lookup

The Y chromosome as a battle ground for sexual selection

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26040272

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1038/NCOMMS8330

1 reference

release_c7dzblsjbnhpvaaq7hu6bdd2lq

9 August 2017

0 references

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/c7dzblsjbnhpvaaq7hu6bdd2lq

24 November 2022

mapped directly with Wikidata item

PMC publication ID

4468903

1 reference

9 August 2017

1 reference