(Q35682384)

English

Two-dimensional IR spectroscopy of protein dynamics using two vibrational labels: a site-specific genetically encoded unnatural amino acid and an active site ligand

scientific article published on 31 August 2011

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

9 August 2017

Two-dimensional IR spectroscopy of protein dynamics using two vibrational labels: a site-specific genetically encoded unnatural amino acid and an active site ligand (English)

1 reference

Europe PubMed Central

PubMed publication ID

9 August 2017

Peter G. Schultz

6

object named as

Peter G Schultz

1 reference

Europe PubMed Central

PubMed publication ID

9 August 2017

Michael D. Fayer

7

object named as

Michael D Fayer

1 reference

Europe PubMed Central

PubMed publication ID

9 August 2017

author name string

Megan C Thielges

1

1 reference

Europe PubMed Central

PubMed publication ID

9 August 2017

Jun Y Axup

2

1 reference

Europe PubMed Central

PubMed publication ID

9 August 2017

Daryl Wong

3

1 reference

Europe PubMed Central

PubMed publication ID

9 August 2017

Hyun Soo Lee

4

1 reference

Europe PubMed Central

PubMed publication ID

9 August 2017

Jean K Chung

5

1 reference

Europe PubMed Central

PubMed publication ID

9 August 2017

language of work or name

0 references

publication date

31 August 2011

1 reference

Europe PubMed Central

PubMed publication ID

9 August 2017

Journal of Physical Chemistry B

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Europe PubMed Central

PubMed publication ID

9 August 2017

115

1 reference

Europe PubMed Central

PubMed publication ID

9 August 2017

38

1 reference

Europe PubMed Central

PubMed publication ID

9 August 2017

11294-11304

1 reference

Europe PubMed Central

PubMed publication ID

9 August 2017

Influence of histidine tag attachment on picosecond protein dynamics.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Protein dynamics in cytochrome P450 molecular recognition and substrate specificity using 2D IR vibrational echo spectroscopy.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Dynamics of the folded and unfolded villin headpiece (HP35) measured with ultrafast 2D IR vibrational echo spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Dynamics of a myoglobin mutant enzyme: 2D IR vibrational echo experiments and simulations.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Characterizing the dynamics of functionally relevant complexes of formate dehydrogenase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Azidohomoalanine: a conformationally sensitive IR probe of protein folding, protein structure, and electrostatics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Characterization of azido-NAD+ to assess its potential as a two-dimensional infrared probe of enzyme dynamics.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Exploring the molecular origins of protein dynamics in the active site of human carbonic anhydrase II

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

FTIR analysis of GPCR activation using azido probes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Empirical amide I vibrational frequency map: application to 2D-IR line shapes for isotope-edited membrane peptide bundles.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Dynamics of liquids, molecules, and proteins measured with ultrafast 2D IR vibrational echo chemical exchange spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Native and unfolded cytochrome c--comparison of dynamics using 2D-IR vibrational echo spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Atomic level computational identification of ligand migration pathways between solvent and binding site in myoglobin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Direct observation of fast protein conformational switching

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Disulfide bond influence on protein structural dynamics probed with 2D-IR vibrational echo spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Two-dimensional infrared spectra reveal relaxation of the nonnucleoside inhibitor TMC278 complexed with HIV-1 reverse transcriptase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Neuroglobin dynamics observed with ultrafast 2D-IR vibrational echo spectroscopy.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Conformational entropy in molecular recognition by proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Substrate binding and protein conformational dynamics measured by 2D-IR vibrational echo spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

A genetically encoded infrared probe.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Site-specific conversion of cysteine thiols into thiocyanate creates an IR probe for electric fields in proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Dynamics of proteins encapsulated in silica sol-gel glasses studied with IR vibrational echo spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

The influence of aqueous versus glassy solvents on protein dynamics: vibrational echo experiments and molecular dynamics simulations.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

CO as a vibrational probe of heme protein active sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

What vibrations tell us about proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Myoglobin-CO conformational substate dynamics: 2D vibrational echoes and MD simulations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Two-dimensional infrared spectroscopy: a promising new method for the time resolution of structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

A steric mechanism for inhibition of CO binding to heme proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

The two-dimensional IR nonlinear spectroscopy of a cyclic penta-peptide in relation to its three-dimensional structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Protein fluctuations are sensed by stimulated infrared echoes of the vibrations of carbon monoxide and azide probes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Structural determinants of the stretching frequency of CO bound to myoglobin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Conformational substates in proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Resonance raman investigations of site-directed mutants of myoglobin: effects of distal histidine replacement.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

27 July 2018

Temperature dependent equilibrium native to unfolded protein dynamics and properties observed with IR absorption and 2D IR vibrational echo experiments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

The Two Dimensional Vibrational Echo of a Nitrile Probe of the Villin HP35 Protein.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

Tracking G-protein-coupled receptor activation using genetically encoded infrared probes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

2D-IR study of a photoswitchable isotope-labeled alpha-helix.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

An enhanced system for unnatural amino acid mutagenesis in E. coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

Two-dimensional IR spectroscopy and isotope labeling defines the pathway of amyloid formation with residue-specific resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

Azido-derivatized compounds as IR probes of local electrostatic environment: Theoretical studies.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

Beta-azidoalanine as an IR probe: application to amyloid Abeta(16-22) aggregation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

Taking apart the two-dimensional infrared vibrational echo spectra: more information and elimination of distortions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

Electrostatic fields near the active site of human aldose reductase: 1. New inhibitors and vibrational stark effect measurements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

Frequency-frequency correlation functions and apodization in two-dimensional infrared vibrational echo spectroscopy: a new approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

Protein ligand migration mapped by nonequilibrium 2D-IR exchange spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

Ultrafast dynamics of myoglobin without the distal histidine: stimulated vibrational echo experiments and molecular dynamics simulations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

Expanding the genetic code

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

A high-resolution probe of protein folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

Myoglobin-CO Substate Structures and Dynamics: Multidimensional Vibrational Echoes and Molecular Dynamics Simulations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

Vibrational Stark effects calibrate the sensitivity of vibrational probes for electric fields in proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

Adding amino acids with novel reactivity to the genetic code of Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

Complex landscape of protein structural dynamics unveiled by nanosecond Laue crystallography

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

Using nitrile-derivatized amino acids as infrared probes of local environment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

Addition of p-azido-L-phenylalanine to the genetic code of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

Biosynthesis of proteins incorporating a versatile set of phenylalanine analogues

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

Multiple site-specific infrared dichroism of CD3-zeta, a transmembrane helix bundle

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

Incorporation of azides into recombinant proteins for chemoselective modification by the Staudinger ligation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

Direct observation of protein vibrations by selective incorporation of spectroscopically observable carbon-deuterium bonds in cytochrome c.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

Crystal structures of myoglobin-ligand complexes at near-atomic resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3261801

25 September 2018

Infrared evidence of azide binding to iron, copper, and non-metal sites in heart cytochrome c oxidase

1 reference

https://pubmed.ncbi.nlm.nih.gov/21823631

12 December 2020

based on heuristic

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Watching hydrogen-bond dynamics in a β-turn by transient two-dimensional infrared spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/21823631

12 December 2020

based on heuristic

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Probing dynamics of complex molecular systems with ultrafast 2D IR vibrational echo spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/21823631

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Site-specific vibrational dynamics of the CD3zeta membrane peptide using heterodyned two-dimensional infrared photon echo spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/21823631

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Infrared studies of azido, cyano, and other derivatives of metmyoglobin, methemoglobin, and hemins

1 reference

https://pubmed.ncbi.nlm.nih.gov/21823631

12 December 2020

based on heuristic

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Residue Specific Resolution of Protein Folding Dynamics Using Isotope-Edited Infrared Temperature Jump Spectroscopy†

1 reference

https://pubmed.ncbi.nlm.nih.gov/21823631

12 December 2020

based on heuristic

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Two-dimensional infrared spectra of the 13C=18O isotopomers of alanine residues in an alpha-helix

1 reference

https://pubmed.ncbi.nlm.nih.gov/21823631

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Infrared studies of azide bound to myoglobin and hemoglobin. Temperature dependence of ionicity

1 reference

https://pubmed.ncbi.nlm.nih.gov/21823631

12 December 2020

based on heuristic

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Fourier transform infrared analysis of the interaction of azide with the active site of oxidized and reduced bovine Cu,Zn superoxide dismutase

1 reference

https://pubmed.ncbi.nlm.nih.gov/21823631

12 December 2020

based on heuristic

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Identifiers

10.1021/JP206986V

1 reference

Europe PubMed Central

PubMed publication ID

9 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

9 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

9 August 2017

ResearchGate publication ID

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