(Q35829497)

10 August 2017

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title

Structural and functional analysis of rice genome (English)

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10 August 2017

Akhilesh K Tyagi

1

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10 August 2017

Jitendra P Khurana

2

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10 August 2017

Paramjit Khurana

3

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10 August 2017

Saurabh Raghuvanshi

4

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10 August 2017

Anumapa Gaur

5

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10 August 2017

Anita Kapur

6

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10 August 2017

Vikrant Gupta

7

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10 August 2017

Dibyendu Kumar

8

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10 August 2017

V Ravi

9

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10 August 2017

Shubha Vij

10

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10 August 2017

Parul Khurana

11

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10 August 2017

Sulabha Sharma

12

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10 August 2017

language of work or name

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1 April 2004

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10 August 2017

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10 August 2017

volume

83

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10 August 2017

issue

1

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10 August 2017

page(s)

79-99

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Base-calling of automated sequencer traces using phred. I. Accuracy assessment

10 August 2017

cites work

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Crossref

https://api.crossref.org/works/10.1007%2FBF02715832

Consed: a graphical tool for sequence finishing

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1007%2FBF02715832

Genomic organization of 57 ribosomal protein genes in rice (Oryza sativa L.) through RFLP mapping

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1007%2FBF02715832

The TIGR rice genome annotation resource: annotating the rice genome and creating resources for plant biologists

21 January 2018

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12 December 2020

Genome relationships: the grass model in current research

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12 December 2020

Physical mapping of the rice genome with YAC clones

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12 December 2020

Proteomics: the first decade and beyond

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12 December 2020

Expressed sequence tags: alternative or complement to whole genome sequences?

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12 December 2020

Gene expression profiles during the initial phase of salt stress in rice

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12 December 2020

Gramene: a resource for comparative grass genomics

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12 December 2020

Comparative sequence analysis of plant nuclear genomes:m microcolinearity and its many exceptions

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12 December 2020

Determination of RAPD markers in rice and their conversion into sequence tagged sites (STSs) and STS-specific primers

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12 December 2020

A vision for the future of genomics research

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12 December 2020

Expression of Xa1, a bacterial blight-resistance gene in rice, is induced by bacterial inoculation

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12 December 2020

Using the transcriptome to annotate the genome

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12 December 2020

Mosaic organization of orthologous sequences in grass genomes

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12 December 2020

Genomics and agriculture. Collaborations in rice

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12 December 2020

Plant genome evolution: lessons from comparative genomics at the DNA level

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12 December 2020

Some like it sticky: targeting of the rice gene Waxy

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12 December 2020

Annotating eukaryote genomes

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12 December 2020

Genome-wide insertional mutagenesis of Arabidopsis thaliana

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12 December 2020

Comparative mapping of Arabidopsis thaliana and Brassica oleracea chromosomes reveals islands of conserved organization

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12 December 2020

Hd1, a major photoperiod sensitivity quantitative trait locus in rice, is closely related to the Arabidopsis flowering time gene CONSTANS.

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12 December 2020

Molecular analysis of rice plants harboring an Ac/Ds transposable element-mediated gene trapping system

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12 December 2020

Obtaining the sequence of the rice genome and lessons learned along the way.

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12 December 2020

Microsatellite DNA markers for rice chromosomes

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12 December 2020

Plant comparative genetics after 10 years

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12 December 2020

Towards map-based cloning of the barley stem rust resistance genes Rpg1 and rpg4 using rice as an intergenomic cloning vehicle

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12 December 2020

Rice as a model for cereal genomics

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12 December 2020

Bacterial artificial chromosome-based physical map of the rice genome constructed by restriction fingerprint analysis

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12 December 2020

Alignment of whole genomes

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12 December 2020

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12 December 2020

Barley stripe mosaic virus-induced gene silencing in a monocot plant

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12 December 2020

Computational gene finding in plants

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12 December 2020

The plant MITE mPing is mobilized in anther culture

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12 December 2020

Quantitative monitoring of gene expression patterns with a complementary DNA microarray

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12 December 2020

Loss-of-function mutations in the rice homeobox gene OSH15 affect the architecture of internodes resulting in dwarf plants

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12 December 2020

Synteny: recent advances and future prospects.

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12 December 2020

A network of rice genes associated with stress response and seed development

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12 December 2020

Cloning and stable maintenance of 300-kilobase-pair fragments of human DNA in Escherichia coli using an F-factor-based vector

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12 December 2020

Rice genetic resources: history, conservation, investigative characterization and use in Japan

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12 December 2020

Arabidopsis-rice: will colinearity allow gene prediction across the eudicot-monocot divide?

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12 December 2020

Efficient gene targeting by homologous recombination in rice

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12 December 2020

Physical mapping of unique nucleotide sequences on identified rice chromosomes.

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12 December 2020

Logitlinear models for the prediction of splice sites in plant pre-mRNA sequences

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12 December 2020

Genetic and physical mapping of a new gene for bacterial blight resistance in rice

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12 December 2020

Mobilization of a transposon in the rice genome

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12 December 2020

tA single amino acid difference distinguishes resistant and susceptible alleles of the rice blast resistance gene Pi-ta

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12 December 2020

Activation tagging in Arabidopsis

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12 December 2020

Rice molecular genetic map using RFLPs and its applications

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12 December 2020

Genome sequence of the nematode C. elegans: a platform for investigating biology

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12 December 2020

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12 December 2020

Early and multiple Ac transpositions in rice suitable for efficient insertional mutagenesis.

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12 December 2020

Mapping of sequence-tagged sites in rice by single strand conformation polymorphism.

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12 December 2020

Transposition of the maizeactivatorelement in transgenic rice plants

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12 December 2020

The genetic colinearity of rice and other cereals on the basis of genomic sequence analysis

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12 December 2020

RiceGAAS: an automated annotation system and database for rice genome sequence

1 reference

12 December 2020

A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica)

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12 December 2020

Arabidopsis microarray service facilities

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12 December 2020

Saturated molecular map of the rice genome based on an interspecific backcross population

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12 December 2020

Development of enhancer trap lines for functional analysis of the rice genome

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12 December 2020

Genomic sequence analysis tools: a user's guide

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12 December 2020

Trans-activation and stable integration of the maize transposable element Ds cotransfected with the Ac transposase gene in transgenic rice plants

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12 December 2020

Conserved noncoding sequences in the grasses

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12 December 2020

A computer-based systematic survey reveals the predominance of small inverted-repeat elements in wild-type rice genes

1 reference

12 December 2020

The Arabidopsis Information Resource (TAIR): a model organism database providing a centralized, curated gateway to Arabidopsis biology, research materials and community

1 reference

12 December 2020

Plant molecular biology and biotechnology research in the post-recombinant DNA era

1 reference

12 December 2020

An active DNA transposon family in rice

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12 December 2020

Post-transcriptional gene silencing by double-stranded RNA

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12 December 2020

Base-calling of automated sequencer traces using phred. II. Error probabilities

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12 December 2020

Current status of the sequence of the rice genome and prospects for finishing the first monocot genome

1 reference

12 December 2020

Linkage map of phenotype and RFLP markers in rice

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12 December 2020

Computational and experimental analysis of microsatellites in rice (Oryza sativa L.): frequency, length variation, transposon associations, and genetic marker potential

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12 December 2020

A 300 kilobase interval genetic map of rice including 883 expressed sequences

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12 December 2020

Sequence and analysis of rice chromosome 4.

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12 December 2020

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

1 reference

12 December 2020

Sequence-tagged sites (STSs) as standard landmarkers in the rice genome

1 reference

12 December 2020

Genome organization in dicots: genome duplication in Arabidopsis and synteny between soybean and Arabidopsis

1 reference

12 December 2020

One large-insert plant-transformation-competent BIBAC library and three BAC libraries of Japonica rice for genome research in rice and other grasses

1 reference

12 December 2020

MOsDB: an integrated information resource for rice genomics

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12 December 2020

Functional genomics: it's all how you read it

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12 December 2020

Comparative genetics in the grasses

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12 December 2020

A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica)

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12 December 2020

Virtual rice: Japan sets up the Rice Simulator Project to create an in silico rice plant

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12 December 2020

Cloning of large segments of exogenous DNA into yeast by means of artificial chromosome vectors

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12 December 2020

Colinearity and gene density in grass genomes

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12 December 2020

Physical mapping of the liguleless linkage group in Sorghum bicolor using rice RFLP-selected sorghum BACs.

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12 December 2020

Construction of YAC contigs on rice chromosome 5.

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12 December 2020

Conservation of microstructure between a sequenced region of the genome of rice and multiple segments of the genome of Arabidopsis thaliana

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12 December 2020

Rice transformation for crop improvement and functional genomics.

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12 December 2020

Recent highlights of the China Rice Functional Genomics Program

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12 December 2020

Comparative genomics between rice and Arabidopsis shows scant collinearity in gene order

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12 December 2020

Positional cloning of rice semidwarfing gene, sd-1: rice "green revolution gene" encodes a mutant enzyme involved in gibberellin synthesis

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12 December 2020

A fine physical map of the rice chromosome 4.

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12 December 2020

Hd6, a rice quantitative trait locus involved in photoperiod sensitivity, encodes the alpha subunit of protein kinase CK2.

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12 December 2020

Gramene, a tool for grass genomics

1 reference

12 December 2020

Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice

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12 December 2020

A transgenic perspective on plant functional genomics

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12 December 2020

Engineering the provitamin A (beta-carotene) biosynthetic pathway into (carotenoid-free) rice endosperm

1 reference

12 December 2020

INE: a rice genome database with an integrated map view

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12 December 2020

Molecular mapping of rice chromosomes

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12 December 2020

Genetic and molecular dissection of quantitative traits in rice

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12 December 2020

Compositional gradients in Gramineae genes

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12 December 2020

A new bacteriophage P1-derived vector for the propagation of large human DNA fragments

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12 December 2020

The genome sequence and structure of rice chromosome 1.

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12 December 2020

Dasheng: a recently amplified nonautonomous long terminal repeat element that is a major component of pericentromeric regions in rice

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12 December 2020

Rice transposable elements: a survey of 73,000 sequence-tagged-connectors

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12 December 2020

Target site specificity of the Tos17 retrotransposon shows a preference for insertion within genes and against insertion in retrotransposon-rich regions of the genome.

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12 December 2020

A high-density rice genetic linkage map with 2275 markers using a single F2 population.

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12 December 2020

Recent advances in large-scale transposon mutagenesis

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12 December 2020

Annotation and BAC/PAC localization of nonredundant ESTs from drought-stressed seedlings of an indica rice

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12 December 2020

Arabidopsis thaliana: a model plant for genome analysis.

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12 December 2020

The rice genome project in Japan

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12 December 2020

Centromere mapping and orientation of the molecular linkage map of rice (Oryza sativa L.).

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12 December 2020

Transposition of the maize Ds element from a viral vector to the rice genome

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12 December 2020

The use of the Monsanto draft rice genome sequence in research

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12 December 2020

High resolution FISH in plants - techniques and applications

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12 December 2020

Sequence-based alignment of sorghum chromosome 3 and rice chromosome 1 reveals extensive conservation of gene order and one major chromosomal rearrangement

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12 December 2020

Towards an accurate sequence of the rice genome

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12 December 2020

T-DNA insertional mutagenesis for functional genomics in rice.

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12 December 2020

Visualization of the terminal structure of rice chromosomes 6 and 12 with multicolor FISH to chromosomes and extended DNA fibers

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12 December 2020

Positional cloning in Arabidopsis. Why it feels good to have a genome initiative working for you.

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12 December 2020

The Arabidopsis transposon Tag1 is active in rice, undergoing germinal transposition and restricted, late somatic excision

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12 December 2020

Rice bioinformatics. analysis of rice sequence data and leveraging the data to other plant species

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12 December 2020

Serial analysis of gene expression

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12 December 2020

A recipe for revolution?

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12 December 2020

Comparative DNA sequence analysis of wheat and rice genomes

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12 December 2020

Molecular characterization of a set of wheat deletion stocks for use in chromosome bin mapping of ESTs

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12 December 2020

Retrotransposons of rice: their regulation and use for genome analysis

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12 December 2020

T-DNA insertional mutagenesis for activation tagging in rice

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12 December 2020

Map-based cloning of a protein kinase gene conferring disease resistance in tomato

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12 December 2020

Rice gibberellin-insensitive dwarf mutant gene Dwarf 1 encodes the alpha-subunit of GTP-binding protein

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12 December 2020

In-Depth View of Structure, Activity, and Evolution of Rice Chromosome 10

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12 December 2020

Ordered YAC clone contigs assigned to rice chromosomes 3 and 11.

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12 December 2020

Contribution of the Tos17 retrotransposon to rice functional genomics

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12 December 2020

Large-scale plant proteomics.

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12 December 2020

Numerous small rearrangements of gene content, order and orientation differentiate grass genomes.

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12 December 2020

Prediction of complete gene structures in human genomic DNA

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12 December 2020

The Human Genome Project: Lessons from Large-Scale Biology

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12 December 2020

Large-scale EST sequencing in rice

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12 December 2020

Survey of transposable elements from rice genomic sequences

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12 December 2020

Expression profiling using cDNA microarrays

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12 December 2020

A comprehensive rice transcript map containing 6591 expressed sequence tag sites

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12 December 2020

Rice at the forefront of plant genome informatics

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12 December 2020

High-resolution pachytene chromosome mapping of bacterial artificial chromosomes anchored by genetic markers reveals the centromere location and the distribution of genetic recombination along chromosome 10 of rice.

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12 December 2020

Embarking on rice functional genomics via cDNA microarray: use of 3' UTR probes for specific gene expression analysis

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12 December 2020

Screening of the rice viviparous mutants generated by endogenous retrotransposon Tos17 insertion. Tagging of a zeaxanthin epoxidase gene and a novel ostatc gene

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12 December 2020

Yeast artificial chromosome clones of rice chromosome 2 ordered using DNA markers

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12 December 2020

Hd3a, a rice ortholog of the Arabidopsis FT gene, promotes transition to flowering downstream of Hd1 under short-day conditions

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12 December 2020

Autonomous transposition of the tobacco retrotransposon Tto1 in rice

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12 December 2020

Grasses as a single genetic system: reassessment 2001

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12 December 2020

The rice genome. Opening the door to comparative plant biology.

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12 December 2020

Perspectives: plant biology. The green revolution strikes gold

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12 December 2020

Gene traps: tools for plant development and genomics

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12 December 2020

Comparative sequence analysis of colinear barley and rice bacterial artificial chromosomes.

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12 December 2020

Construction and utility of 10-kb libraries for efficient clone-gap closure for rice genome sequencing

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12 December 2020

Toward a cytological characterization of the rice genome

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12 December 2020

Introduction and transposition of the maize transposable element Ac in rice (Oryza sativa L.).

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12 December 2020

Genetic and physical mapping of Pi5(t), a locus associated with broad-spectrum resistance to rice blast

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12 December 2020

Sequence analysis of the long arm of rice chromosome 11 for rice-wheat synteny

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12 December 2020

Genome-wide intraspecific DNA-sequence variations in rice

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12 December 2020

An ordered yeast artificial chromosome library covering over half of rice chromosome 6.

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12 December 2020

Isolation and expression analysis of salt stress-associated ESTs from contrasting rice cultivars using a PCR-based subtraction method

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12 December 2020

Diversity in the Oryza genus

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12 December 2020

Functional rice centromeres are marked by a satellite repeat and a centromere-specific retrotransposon

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12 December 2020

Cloning and Mapping of Telomere-Associated Sequences from Rice

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12 December 2020

Sequencing the rice genome

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12 December 2020

What is finished, and why does it matter

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12 December 2020

Isolation and Characterization of Rice Phytochrome A Mutants

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12 December 2020

Detailed comparative mapping of cereal chromosome regions corresponding to the Ph1 locus in wheat

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12 December 2020

Physical mapping of rice chromosomes 8 and 9 with YAC clones

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12 December 2020

Cereal Genome Evolution: Grasses, line up and form a circle

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12 December 2020

Conserved Noncoding Sequences among Cultivated Cereal Genomes Identify Candidate Regulatory Sequence Elements and Patterns of Promoter Evolution[W]

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12 December 2020

The Sequence of the Human Genome

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12 December 2020

Transcriptional control of nutrient partitioning during rice grain filling.

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12 December 2020

Highly efficient production and characterization of T-DNA plants for rice ( Oryza sativa L.) functional genomics

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12 December 2020

T-DNA as an insertional mutagen in Arabidopsis

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12 December 2020

Comparative genomics in the grass family: molecular characterization of grass genome structure and evolution

1 reference

12 December 2020

International Rice Genome Sequencing Project: the effort to completely sequence the rice genome

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12 December 2020

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

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12 December 2020

The genome sequence of Drosophila melanogaster

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12 December 2020

Activation tagging: a means of isolating genes implicated as playing a role in plant growth and development

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12 December 2020

Identification of protein coding regions in the human genome by quadratic discriminant analysis

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12 December 2020

Distribution and characterization of over 1000 T-DNA tags in rice genome.

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12 December 2020

Ab initio gene finding in Drosophila genomic DNA

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12 December 2020

A receptor kinase-like protein encoded by the rice disease resistance gene, Xa21

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12 December 2020

Comparison of rice and Arabidopsis annotation.

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12 December 2020

Search for and analysis of single nucleotide polymorphisms (SNPs) in rice (Oryza sativa, Oryza rufipogon) and establishment of SNP markers

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12 December 2020

The current excitement in bioinformatics-analysis of whole-genome expression data: how does it relate to protein structure and function?

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12 December 2020

Extensive duplication and reshuffling in the Arabidopsis genome

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12 December 2020

Comparison of genes among cereals

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12 December 2020

Comparing sequenced segments of the tomato and Arabidopsis genomes: large-scale duplication followed by selective gene loss creates a network of synteny

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12 December 2020

A physical map with yeast artificial chromosome (YAC) clones covering 63% of the 12 rice chromosomes

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12 December 2020

Synteny between Arabidopsis thaliana and rice at the genome level: a tool to identify conservation in the ongoing rice genome sequencing project

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12 December 2020

Origin, dispersal, cultivation and variation of rice

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12 December 2020

Metaphase and interphase fluorescence in situ hybridization mapping of the rice genome with bacterial artificial chromosomes

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12 December 2020

Comparative mapping between Arabidopsis thaliana and Brassica nigra indicates that Brassica genomes have evolved through extensive genome replication accompanied by chromosome fusions and frequent rearrangements

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12 December 2020

A rice spotted leaf gene, Spl7, encodes a heat stress transcription factor protein

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12 December 2020

Rice genomes: a grainy view of future evolutionary research

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12 December 2020

Physical mapping of rice chromosome 1 with yeast artificial chromosomes (YACs).

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12 December 2020

Ac as a tool for the functional genomics of rice

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12 December 2020

An integrated physical and genetic map of the rice genome

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12 December 2020

Bioinformatic resources, challenges, and opportunities using Arabidopsis as a model organism in a post-genomic era.

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12 December 2020

Assignment of YAC clones spanning rice chromosomes 10 and 12.

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12 December 2020

Toward a unified genetic map of higher plants, transcending the monocot-dicot divergence

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12 December 2020

Expressed sequence tags--ESTablishing bridges between genomes

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12 December 2020

Development and mapping of 2240 new SSR markers for rice (Oryza sativa L.).

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12 December 2020

FISH technology in chromosome and genome research

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12 December 2020

Comparative Sequence Analysis Reveals Extensive Microcolinearity in the Lateral Suppressor Regions of the Tomato, Arabidopsis, and Capsella Genomes

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12 December 2020

Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events

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12 December 2020

Genome annotation: which tools do we have for it?

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12 December 2020

T-DNA insertion mutagenesis in Arabidopsis: going back and forth

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12 December 2020

Identification of a YAC clone carrying the Xa-1 allele, a bacterial blight resistance gene in rice

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12 December 2020

Technical advance: transcript profiling in rice (Oryza sativa L.) seedlings using serial analysis of gene expression (SAGE)

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12 December 2020

Targeting induced local lesions IN genomes (TILLING) for plant functional genomics

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12 December 2020

Initial sequencing and analysis of the human genome

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12 December 2020

Physical mapping of rice chromosomes 4 and 7 using YAC clones.

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12 December 2020

Overview of the yeast genome.

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12 December 2020

The Pib gene for rice blast resistance belongs to the nucleotide binding and leucine-rich repeat class of plant disease resistance genes

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12 December 2020

Fine genetic mapping of a gene required for Rice yellow mottle virus cell-to-cell movement

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12 December 2020

Identifiers

DOI

10.1007/BF02715832

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10 August 2017

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