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Nucleosome positioning: bringing order to the eukaryotic genome
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scholarly article
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stated in
Europe PubMed Central
PMCID
3348441
retrieved
11 August 2017
title
Nucleosome positioning: bringing order to the eukaryotic genome
(English)
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stated in
Europe PubMed Central
PMCID
3348441
retrieved
11 August 2017
author name string
Vishwanath R Iyer
series ordinal
1
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Europe PubMed Central
PMCID
3348441
retrieved
11 August 2017
language of work or name
English
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inferred from title
publication date
14 March 2012
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Europe PubMed Central
PMCID
3348441
retrieved
11 August 2017
published in
Trends in Cell Biology
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stated in
Europe PubMed Central
PMCID
3348441
retrieved
11 August 2017
volume
22
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Europe PubMed Central
PMCID
3348441
retrieved
11 August 2017
issue
5
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Europe PubMed Central
PMCID
3348441
retrieved
11 August 2017
page(s)
250-256
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stated in
Europe PubMed Central
PMCID
3348441
retrieved
11 August 2017
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2 October 2017
Evolutionary divergence of intrinsic and trans-regulated nucleosome positioning sequences reveals plastic rules for chromatin organization
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Substantial histone reduction modulates genomewide nucleosomal occupancy and global transcriptional output
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2 October 2017
A packing mechanism for nucleosome organization reconstituted across a eukaryotic genome
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2 October 2017
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2 October 2017
Quantitative test of the barrier nucleosome model for statistical positioning of nucleosomes up- and downstream of transcription start sites
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2 October 2017
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Divergence of nucleosome positioning between two closely related yeast species: genetic basis and functional consequences
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2 October 2017
High nucleosome occupancy is encoded at human regulatory sequences
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2 October 2017
The chromatin remodeller ACF acts as a dimeric motor to space nucleosomes
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PubMed Central
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2 October 2017
G+C content dominates intrinsic nucleosome occupancy
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PubMed Central
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2 October 2017
Histone H3K4 and K36 methylation, Chd1 and Rpd3S oppose the functions of Saccharomyces cerevisiae Spt4-Spt5 in transcription
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PubMed Central
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2 October 2017
Histones: annotating chromatin
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PubMed Central
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2 October 2017
High-resolution nucleosome mapping reveals transcription-dependent promoter packaging
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2 October 2017
Nucleosomal fluctuations govern the transcription dynamics of RNA polymerase II.
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2 October 2017
Intrinsic histone-DNA interactions are not the major determinant of nucleosome positions in vivo
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2 October 2017
Nucleosome positioning: how is it established, and why does it matter?
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PubMed Central
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2 October 2017
Mechanisms that specify promoter nucleosome location and identity
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2 October 2017
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2 October 2017
The DNA-encoded nucleosome organization of a eukaryotic genome
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2 October 2017
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2 October 2017
Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domains
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PubMed Central
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2 October 2017
Identifying positioned nucleosomes with epigenetic marks in human from ChIP-Seq
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PubMed Central
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2 October 2017
The insulator binding protein CTCF positions 20 nucleosomes around its binding sites across the human genome
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PubMed Central
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2 October 2017
Combinatorial patterns of histone acetylations and methylations in the human genome
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PubMed Central
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2 October 2017
A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome
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2 October 2017
Nucleosome organization in the Drosophila genome.
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2 October 2017
Dynamic remodeling of individual nucleosomes across a eukaryotic genome in response to transcriptional perturbation
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2 October 2017
Dynamic regulation of nucleosome positioning in the human genome
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PubMed Central
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2 October 2017
Chromatin remodelling at promoters suppresses antisense transcription
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2 October 2017
A high-resolution atlas of nucleosome occupancy in yeast
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2 October 2017
High-resolution profiling of histone methylations in the human genome
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2 October 2017
A common topology for bacterial and eukaryotic transcription initiation?
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2 October 2017
A genomic code for nucleosome positioning
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PubMed Central
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2 October 2017
Histone variant H2A.Z marks the 5' ends of both active and inactive genes in euchromatin
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2 October 2017
Genome-scale identification of nucleosome positions in S. cerevisiae
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2 October 2017
Phylogenomics of the nucleosome
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PubMed Central
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2 October 2017
Chromosomal landscape of nucleosome-dependent gene expression and silencing in yeast.
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2 October 2017
Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome
1 reference
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PubMed Central
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2 October 2017
Regulation of gene expression by nucleosomes
1 reference
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PubMed Central
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2 October 2017
Multiple functions of nucleosomes and regulatory factors in transcription
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PubMed Central
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2 October 2017
Statistical distributions of nucleosomes: nonrandom locations by a stochastic mechanism
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PubMed Central
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2 October 2017
Nucleosomes: regulators of transcription
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PubMed Central
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2 October 2017
Nucleosomes and the accessibility problem
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PubMed Central
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11 July 2018
A role for Snf2-related nucleosome-spacing enzymes in genome-wide nucleosome organization
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11 July 2018
The nucleosome map of the mammalian liver
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PubMed Central
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11 July 2018
Nucleosome fragility reveals novel functional states of chromatin and poises genes for activation
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PubMed Central
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11 July 2018
High-resolution genome-wide mapping of the primary structure of chromatin
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PubMed Central
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11 July 2018
Nucleosome sequence preferences influence in vivo nucleosome organization
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PubMed Central
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11 July 2018
Relationship between nucleosome positioning and DNA methylation
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3348441
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11 July 2018
Gene expression divergence in yeast is coupled to evolution of DNA-encoded nucleosome organization
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3348441
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11 July 2018
Chromatin and transcription--how transcription factors battle with a repressive chromatin environment
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PubMed Central
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11 July 2018
Are nucleosome positions in vivo primarily determined by histone-DNA sequence preferences?
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PubMed Central
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24 September 2018
The Major Architects of Chromatin: Architectural Proteins in Bacteria, Archaea and Eukaryotes
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14 November 2018
Schizosaccharomyces pombe genome-wide nucleosome mapping reveals positioning mechanisms distinct from those of Saccharomyces cerevisiae
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PubMed
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https://pubmed.ncbi.nlm.nih.gov/22421062
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12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Evidence against a genomic code for nucleosome positioning. Reply to "Nucleosome sequence preferences influence in vivo nucleosome organization.".
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/22421062
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
A preoccupied position on nucleosomes
1 reference
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PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/22421062
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12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1016/J.TCB.2012.02.004
1 reference
stated in
Europe PubMed Central
PMCID
3348441
retrieved
11 August 2017
PMCID
3348441
1 reference
stated in
Europe PubMed Central
PMCID
3348441
retrieved
11 August 2017
PubMed ID
22421062
1 reference
stated in
Europe PubMed Central
PMCID
3348441
retrieved
11 August 2017
ResearchGate publication ID
221708062
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