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Coupling polymerase pausing and chromatin landscapes for precise regulation of transcription.
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3371112
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25 January 2020
title
Coupling polymerase pausing and chromatin landscapes for precise regulation of transcription
(English)
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25 January 2020
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Daniel A Gilchrist
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25 January 2020
Karen Adelman
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25 January 2020
author name string
Daniel A Gilchrist
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1
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3371112
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11 August 2017
Karen Adelman
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2
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3371112
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11 August 2017
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English
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publication date
2 March 2012
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25 January 2020
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Biochimica et Biophysica Acta
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PMC publication ID
3371112
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25 January 2020
volume
1819
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3371112
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25 January 2020
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7
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25 January 2020
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700-706
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25 January 2020
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Global analysis of short RNAs reveals widespread promoter-proximal stalling and arrest of Pol II in Drosophila
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Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters
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NELF-mediated stalling of Pol II can enhance gene expression by blocking promoter-proximal nucleosome assembly
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NELF and GAGA factor are linked to promoter-proximal pausing at many genes in Drosophila
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Chromatin disassembly from the PHO5 promoter is essential for the recruitment of the general transcription machinery and coactivators
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2 October 2017
Nucleosomes are not necessary for promoter-proximal pausing in vitro on the Drosophila hsp70 promoter
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2 October 2017
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2 October 2017
DNase I hypersensitive sites in Drosophila chromatin occur at the 5' ends of regions of transcription.
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2 October 2017
RNA polymerase II interacts with the promoter region of the noninduced hsp70 gene in Drosophila melanogaster cells
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2 October 2017
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Nucleosomes are well positioned in exons and carry characteristic histone modifications
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11 July 2018
A unifying model for the selective regulation of inducible transcription by CpG islands and nucleosome remodeling
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11 July 2018
Rapid, transcription-independent loss of nucleosomes over a large chromatin domain at Hsp70 loci
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11 July 2018
Role of nucleosome remodeling factor NURF in transcriptional activation of chromatin
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11 July 2018
The RNA polymerase II molecule at the 5' end of the uninduced hsp70 gene of D. melanogaster is transcriptionally engaged.
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11 July 2018
Nucleosome positioning modulates accessibility of regulatory proteins to the mouse mammary tumor virus promoter
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11 July 2018
Nucleosome positioning as a determinant of exon recognition
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23 September 2018
Removal of promoter nucleosomes by disassembly rather than sliding in vivo
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23 September 2018
Histones are first hyperacetylated and then lose contact with the activated PHO5 promoter.
1 reference
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reference URL
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23 September 2018
Purification and properties of an ATP-dependent nucleosome remodeling factor.
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23 September 2018
The 5' ends of Drosophila heat shock genes in chromatin are hypersensitive to DNase I.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3371112
retrieved
23 September 2018
Chromatin organization marks exon-intron structure
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3371112
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5 December 2018
Chromatin structure of hsp 70 genes, activated by heat shock: selective removal of histones from the coding region and their absence from the 5' region
1 reference
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PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/22406341
retrieved
12 December 2020
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Identifiers
DOI
10.1016/J.BBAGRM.2012.02.015
1 reference
stated in
Europe PubMed Central
PMC publication ID
3371112
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22406341%20AND%20SRC:MED&resulttype=core&format=json
retrieved
25 January 2020
PMC publication ID
3371112
1 reference
stated in
Europe PubMed Central
PMC publication ID
3371112
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22406341%20AND%20SRC:MED&resulttype=core&format=json
retrieved
25 January 2020
PubMed publication ID
22406341
1 reference
stated in
Europe PubMed Central
PMC publication ID
3371112
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22406341%20AND%20SRC:MED&resulttype=core&format=json
retrieved
25 January 2020
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