(Q36243522)

13 August 2017

Label-free quantitative LC-MS proteomics of Alzheimer's disease and normally aged human brains (English)

1 reference

13 August 2017

0 references

Vladislav A Petyuk

2

0 references

Jennifer Clarke

object named as

Jennifer Clarke

6

0 references

Richard D. Smith

object named as

Richard D Smith

8

0 references

author name string

Victor P Andreev

1

1 reference

13 August 2017

Heather M Brewer

3

1 reference

13 August 2017

Yuliya V Karpievitch

4

1 reference

13 August 2017

Fang Xie

5

1 reference

13 August 2017

David Camp

7

1 reference

13 August 2017

Andrew P Lieberman

9

1 reference

13 August 2017

Roger L Albin

10

1 reference

13 August 2017

Zafar Nawaz

11

1 reference

13 August 2017

Jimmy El Hokayem

12

1 reference

13 August 2017

Amanda J Myers

13

1 reference

13 August 2017

17 May 2012

1 reference

Journal of Proteome Research

13 August 2017

1 reference

13 August 2017

11

1 reference

13 August 2017

6

1 reference

13 August 2017

3053-3067

1 reference

describes a project that uses

13 August 2017

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3445701/fullTextXML

inferred from PubMed Central ID database lookup

cites work

Circulating biomarkers of protein oxidation for Alzheimer disease: expectations within limits

1 reference

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The "Alzheimer's disease signature": potential perspectives for novel biomarkers.

1 October 2017

1 reference

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Direct evidence of phosphorylated neuronal intermediate filament proteins in neurofibrillary tangles (NFTs): phosphoproteomics of Alzheimer's NFTs

1 October 2017

1 reference

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Quantitative proteomics analysis of phosphorylated proteins in the hippocampus of Alzheimer's disease subjects

1 October 2017

1 reference

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Systems biology of Alzheimer's disease: how diverse molecular changes result in memory impairment in AD.

1 October 2017

1 reference

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Whole transcriptome sequencing reveals gene expression and splicing differences in brain regions affected by Alzheimer's disease

1 October 2017

1 reference

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Generating and navigating proteome maps using mass spectrometry.

1 October 2017

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Distribution and expression of picalm in Alzheimer disease

1 October 2017

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Genomics and pharmacogenomics of dementia

1 October 2017

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Association of CR1, CLU and PICALM with Alzheimer's disease in a cohort of clinically characterized and neuropathologically verified individuals

1 October 2017

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An update on clinical proteomics in Alzheimer's research

1 October 2017

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DtaRefinery, a software tool for elimination of systematic errors from parent ion mass measurements in tandem mass spectra data sets

1 October 2017

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Target-decoy search strategy for mass spectrometry-based proteomics

1 October 2017

1 reference

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Axonal transport proteomics reveals mobilization of translation machinery to the lesion site in injured sciatic nerve

1 October 2017

1 reference

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Oxidatively modified, mitochondria-relevant brain proteins in subjects with Alzheimer disease and mild cognitive impairment

1 October 2017

1 reference

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Proteomics analysis reveals novel components in the detergent-insoluble subproteome in Alzheimer's disease

1 October 2017

1 reference

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Genome-wide association study identifies variants at CLU and CR1 associated with Alzheimer's disease

1 October 2017

1 reference

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Genome-wide association study identifies variants at CLU and PICALM associated with Alzheimer's disease

1 October 2017

1 reference

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Mapping protein abundance patterns in the brain using voxelation combined with liquid chromatography and mass spectrometry

1 October 2017

1 reference

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Normalization of peak intensities in bottom-up MS-based proteomics using singular value decomposition

1 October 2017

1 reference

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Endothelin-converting enzyme-2 is increased in Alzheimer's disease and up-regulated by Abeta.

1 October 2017

1 reference

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A statistical framework for protein quantitation in bottom-up MS-based proteomics.

1 October 2017

1 reference

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Genetic control of human brain transcript expression in Alzheimer disease

1 October 2017

1 reference

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Decon2LS: An open-source software package for automated processing and visualization of high resolution mass spectrometry data

1 October 2017

1 reference

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Phosphoproteomic analysis of human brain by calcium phosphate precipitation and mass spectrometry

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

DAnTE: a statistical tool for quantitative analysis of -omics data.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Activating the ubiquitin family: UBA6 challenges the field

1 October 2017

1 reference

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Redox proteomic identification of 4-hydroxy-2-nonenal-modified brain proteins in amnestic mild cognitive impairment: insight into the role of lipid peroxidation in the progression and pathogenesis of Alzheimer's disease

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

DeconMSn: a software tool for accurate parent ion monoisotopic mass determination for tandem mass spectra

1 October 2017

1 reference

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A transcriptome database for astrocytes, neurons, and oligodendrocytes: a new resource for understanding brain development and function

1 October 2017

1 reference

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Role of the ubiquitin proteasome system in Alzheimer's disease

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

A novel panel of cerebrospinal fluid biomarkers for the differential diagnosis of Alzheimer's disease versus normal aging and frontotemporal dementia

1 October 2017

1 reference

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E1-L2 activates both ubiquitin and FAT10

1 October 2017

1 reference

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Is proteomics the new genomics?

1 October 2017

1 reference

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Comparative analysis of microarray normalization procedures: effects on reverse engineering gene networks

1 October 2017

1 reference

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VIPER: an advanced software package to support high-throughput LC-MS peptide identification

1 October 2017

1 reference

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Proteomics of Alzheimer's disease: understanding mechanisms and seeking biomarkers

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Novel panel of cerebrospinal fluid biomarkers for the prediction of progression to Alzheimer dementia in patients with mild cognitive impairment

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Spatial mapping of protein abundances in the mouse brain by voxelation integrated with high-throughput liquid chromatography-mass spectrometry

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Robust algorithm for alignment of liquid chromatography-mass spectrometry analyses in an accurate mass and time tag data analysis pipeline

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Detection of biomarkers with a multiplex quantitative proteomic platform in cerebrospinal fluid of patients with neurodegenerative disorders.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Advances and challenges in liquid chromatography-mass spectrometry-based proteomics profiling for clinical applications

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Genetics, transcriptomics, and proteomics of Alzheimer's disease

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Mass spectrometry-based proteomics turns quantitative

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Clinical phenotypic heterogeneity of Alzheimer's disease associated with mutations of the presenilin-1 gene

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

The role of P-glycoprotein in cerebral amyloid angiopathy; implications for the early pathogenesis of Alzheimer's disease.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Integrated transcriptome and proteome data: the challenges ahead

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Housekeeping proteins: a preliminary study illustrating some limitations as useful references in protein expression studies.

1 October 2017

1 reference

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Alzheimer's disease meets the ubiquitin-proteasome system

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Discordant protein and mRNA expression in lung adenocarcinomas

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

The use of accurate mass tags for high-throughput microbial proteomics

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Characterization of the glycosylation profiles of Alzheimer's beta -secretase protein Asp-2 expressed in a variety of cell lines.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

14-3-3 proteins: structure, function, and regulation

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Inference of population structure using multilocus genotype data

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Gene ontology: tool for the unification of biology

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Correlation between protein and mRNA abundance in yeast

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

The future of genetic studies of complex human diseases

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Increased Selectivity, Analytical Precision, and Throughput in Targeted Proteomics

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Alzheimer's disease: mRNA expression profiles of multiple patients show alterations of genes involved with calcium signaling

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Heritability for Alzheimer's disease: the study of dementia in Swedish twins

29 June 2018

1 reference

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Prevalence of Alzheimer's disease in a community population of older persons. Higher than previously reported.

29 June 2018

1 reference

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Biomarkers in Alzheimer's disease drug development.

29 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Dynamics of plasma proteome during leptin-replacement therapy in genetically based leptin deficiency.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Global proteomic profiling reveals altered proteomic signature in schizophrenia serum.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Medial temporal lobe atrophy on MRI differentiates Alzheimer's disease from dementia with Lewy bodies and vascular cognitive impairment: a prospective study with pathological verification of diagnosis.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Classification and prediction of clinical Alzheimer's diagnosis based on plasma signaling proteins

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Proteomics analysis of the Alzheimer's disease hippocampal proteome

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Cerebrospinal fluid proteomic biomarkers for Alzheimer's disease.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Quantitative proteomics of cerebrospinal fluid from patients with Alzheimer disease.

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Quantitative proteomic analysis of age-related changes in human cerebrospinal fluid

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Quantification of proteins and metabolites by mass spectrometry without isotopic labeling or spiked standards

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Proteomic profiling and neurodegeneration in Alzheimer's disease

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Deposition of Alzheimer's beta-amyloid is inversely correlated with P-glycoprotein expression in the brains of elderly non-demented humans

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Up-regulation of calcineurin Abeta mRNA in the Alzheimer's disease brain: assessment by cDNA microarray

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

Predominance of neuronal mRNAs in individual Alzheimer's disease senile plaques

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

A survey of genetic human cortical gene expression

22 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3445701

From proteomics to biomarker discovery in Alzheimer's disease

5 December 2018

1 reference

12 December 2020

Heterogeneity in Alzheimer's disease

1 reference

12 December 2020

Utility of Accurate Mass Tags for Proteome-Wide Protein Identification

1 reference

12 December 2020

An accurate mass tag strategy for quantitative and high-throughput proteome measurements

1 reference

12 December 2020

Quantitative proteomic analysis by accurate mass retention time pairs

1 reference

12 December 2020

Evidence for disease and antipsychotic medication effects in post-mortem brain from schizophrenia patients

1 reference

12 December 2020

Identifiers

DOI

10.1021/PR3001546

1 reference

13 August 2017

1 reference

13 August 2017

PubMed publication ID

22559202

1 reference