(Q36789938)

16 August 2017

Doa1 targets ubiquitinated substrates for mitochondria-associated degradation (English)

1 reference

ERMES complex subunit MDM34 YGL219C

16 August 2017

1 reference

Msp1p YGR028W

1 reference

AAA family ATPase CDC48 YDL126C

1 reference

Mitofusin YBR179C

1 reference

Nuclear protein localization protein 4 YBR170C

1 reference

Doa1p YKL213C

1 reference

Polyubiquitin-binding protein UFD1 YGR048W

1 reference

protein ubiquitination

1 reference

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27044889%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

author name string

Xi Wu

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27044889%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

Lanlan Li

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27044889%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

language of work or name

English

0 references

publication date

4 April 2016

1 reference

16 August 2017

Journal of Cell Biology

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27044889%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

volume

213

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27044889%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27044889%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

page(s)

49-63

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27044889%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

2 June 2020

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4828692/fullTextXML

inferred from PubMed Central ID database lookup

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29 September 2017

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A stalled retrotranslocation complex reveals physical linkage between substrate recognition and proteasomal degradation during ER-associated degradation

29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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Cdc48/p97 promotes degradation of aberrant nascent polypeptides bound to the ribosome

29 September 2017

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The homozygote VCP(R¹⁵⁵H/R¹⁵⁵H) mouse model exhibits accelerated human VCP-associated disease pathology

29 September 2017

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29 September 2017

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29 September 2017

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Distinct conformations of the protein complex p97-Ufd1-Npl4 revealed by electron cryomicroscopy

29 September 2017

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Mitochondrial quality control by the ubiquitin-proteasome system

29 September 2017

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Selective regulation of autophagy by the Iml1-Npr2-Npr3 complex in the absence of nitrogen starvation

29 September 2017

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Cdc48: a power machine in protein degradation

29 September 2017

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Regulating mitochondrial outer membrane proteins by ubiquitination and proteasomal degradation

29 September 2017

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Pathogenic VCP/TER94 alleles are dominant actives and contribute to neurodegeneration by altering cellular ATP level in a Drosophila IBMPFD model

29 September 2017

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Cdc48/p97 mediates UV-dependent turnover of RNA Pol II.

29 September 2017

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29 September 2017

Mechanisms of mitophagy

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Proteasome and p97 mediate mitophagy and degradation of mitofusins induced by Parkin

29 September 2017

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Exome sequencing reveals VCP mutations as a cause of familial ALS

29 September 2017

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The AAA-ATPase p97 is essential for outer mitochondrial membrane protein turnover

29 September 2017

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A stress-responsive system for mitochondrial protein degradation

29 September 2017

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WD40 Repeat Propellers Define a Ubiquitin-Binding Domain that Regulates Turnover of F Box Proteins

29 September 2017

1 reference

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Crystal structure of a PFU-PUL domain pair of Saccharomyces cerevisiae Doa1/Ufd3

29 September 2017

1 reference

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Structure and Function of the PLAA/Ufd3-p97/Cdc48 Complex

29 September 2017

1 reference

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An Armadillo motif in Ufd3 interacts with Cdc48 and is involved in ubiquitin homeostasis and protein degradation

29 September 2017

1 reference

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Atg32 is a mitochondrial protein that confers selectivity during mitophagy

29 September 2017

1 reference

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Mitochondria-anchored receptor Atg32 mediates degradation of mitochondria via selective autophagy

29 September 2017

1 reference

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An ER-mitochondria tethering complex revealed by a synthetic biology screen

29 September 2017

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Physiological functions of the HECT family of ubiquitin ligases

29 September 2017

1 reference

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Structural Basis for Ubiquitin Recognition by a Novel Domain from Human Phospholipase A2-activating Protein

29 September 2017

1 reference

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Enzymatic assembly of DNA molecules up to several hundred kilobases

29 September 2017

1 reference

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The ubiquitylation machinery of the endoplasmic reticulum

29 September 2017

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UBXD7 binds multiple ubiquitin ligases and implicates p97 in HIF1alpha turnover

29 September 2017

1 reference

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Ubiquitin-proteasome-dependent degradation of a mitofusin, a critical regulator of mitochondrial fusion

29 September 2017

1 reference

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Structural insights into the p97-Ufd1-Npl4 complex.

29 September 2017

1 reference

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Crucial mitochondrial impairment upon CDC48 mutation in apoptotic yeast.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Domain interactions within Fzo1 oligomers are essential for mitochondrial fusion

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Conformational changes in the AAA ATPase p97-p47 adaptor complex

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Doa1 is a Cdc48 adapter that possesses a novel ubiquitin binding domain

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Functional division of substrate processing cofactors of the ubiquitin-selective Cdc48 chaperone

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Proteomic analysis of the yeast mitochondrial outer membrane reveals accumulation of a subclass of preproteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Ubx2 links the Cdc48 complex to ER-associated protein degradation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Membrane-bound Ubx2 recruits Cdc48 to ubiquitin ligases and their substrates to ensure efficient ER-associated protein degradation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

A versatile toolbox for PCR-based tagging of yeast genes: new fluorescent proteins, more markers and promoter substitution cassettes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Bro1 coordinates deubiquitination in the multivesicular body pathway by recruiting Doa4 to endosomes.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Inclusion body myopathy associated with Paget disease of bone and frontotemporal dementia is caused by mutant valosin-containing protein

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Function of the p97-Ufd1-Npl4 complex in retrotranslocation from the ER to the cytosol: dual recognition of nonubiquitinated polypeptide segments and polyubiquitin chains

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Direct binding of ubiquitin conjugates by the mammalian p97 adaptor complexes, p47 and Ufd1-Npl4.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Getting started with yeast

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Protein dislocation from the ER requires polyubiquitination and the AAA-ATPase Cdc48.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

The AAA ATPase Cdc48/p97 and its partners transport proteins from the ER into the cytosol

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

A conserved ubiquitin ligase of the nuclear envelope/endoplasmic reticulum that functions in both ER-associated and Matalpha2 repressor degradation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Yeast vectors for integration at the HO locus

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Sec61p-independent degradation of the tail-anchored ER membrane protein Ubc6p

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Proteasomal proteomics: identification of nucleotide-sensitive proteasome-interacting proteins by mass spectrometric analysis of affinity-purified proteasomes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

The unfolded protein response regulates multiple aspects of secretory and membrane protein biogenesis and endoplasmic reticulum quality control

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

A regulatory link between ER-associated protein degradation and the unfolded-protein response

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

A novel ubiquitination factor, E4, is involved in multiubiquitin chain assembly.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Fzo1p is a mitochondrial outer membrane protein essential for the biogenesis of functional mitochondria in Saccharomyces cerevisiae

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Role of 26S proteasome and HRD genes in the degradation of 3-hydroxy-3-methylglutaryl-CoA reductase, an integral endoplasmic reticulum membrane protein

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Cdc48p interacts with Ufd3p, a WD repeat protein required for ubiquitin-mediated proteolysis in Saccharomyces cerevisiae.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

ER degradation of a misfolded luminal protein by the cytosolic ubiquitin-proteasome pathway

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

The YTA10-12 complex, an AAA protease with chaperone-like activity in the inner membrane of mitochondria

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Der1, a novel protein specifically required for endoplasmic reticulum degradation in yeast

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Transcriptional induction of genes encoding endoplasmic reticulum resident proteins requires a transmembrane protein kinase

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

PIM1 encodes a mitochondrial ATP-dependent protease that is required for mitochondrial function in the yeast Saccharomyces cerevisiae.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Large-scale analysis of gene expression, protein localization, and gene disruption in Saccharomyces cerevisiae

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

A family of proteins structurally and functionally related to the E6-AP ubiquitin-protein ligase

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

A proteolytic pathway that recognizes ubiquitin as a degradation signal

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

A yeast mutant lacking mitochondrial manganese-superoxide dismutase is hypersensitive to oxygen

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

A novel, rapid method for the isolation of terminal sequences from yeast artificial chromosome (YAC) clones

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Multifunctional yeast high-copy-number shuttle vectors

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Cdc48p(Npl4p/Ufd1p) binds and segregates membrane-anchored/tethered complexes via a polyubiquitin signal present on the anchors

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Cdc48p/p97-mediated regulation of mitochondrial morphology is Vms1p-independent.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Transgenic mice expressing mutant forms VCP/p97 recapitulate the full spectrum of IBMPFD including degeneration in muscle, brain and bone.

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

System of centromeric, episomal, and integrative vectors based on drug resistance markers for Saccharomyces cerevisiae.

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Distinct AAA-ATPase p97 complexes function in discrete steps of nuclear assembly.

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

An interlaboratory comparison of physiological and genetic properties of four Saccharomyces cerevisiae strains

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4828692

Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae

5 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1083%2FJCB.201510098

Mitochondrial redox signalling at a glance

21 January 2018

1 reference

12 December 2020

Isolation and subfractionation of mitochondria from the yeast Saccharomyces cerevisiae

1 reference

12 December 2020

Ugo1 and Mdm30 act sequentially during Fzo1-mediated mitochondrial outer membrane fusion

1 reference

12 December 2020

Requirement for the yeast gene LON in intramitochondrial proteolysis and maintenance of respiration

1 reference

12 December 2020

Identifiers

DOI

10.1083/JCB.201510098

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27044889%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27044889%20AND%20SRC:MED&resulttype=core&format=json

2 June 2020

1 reference