(Q37842302)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21322495%20AND%20SRC:MED&resulttype=core&format=json

22 January 2020

title

The quest for a functional substrate access tunnel in FeFe hydrogenase (English)

1 reference

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22 January 2020

1

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22 January 2020

Vincent Fourmond

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21322495%20AND%20SRC:MED&resulttype=core&format=json

22 January 2020

Laurent Cournac

5

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22 January 2020

Christophe Léger

10

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22 January 2020

author name string

Pierre Ezanno

2

1 reference

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22 January 2020

Carole Baffert

3

1 reference

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22 January 2020

Juan C Fontecilla-Camps

6

1 reference

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22 January 2020

Philippe Soucaille

7

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22 January 2020

Patrick Bertrand

8

1 reference

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22 January 2020

Isabelle Meynial-Salles

9

1 reference

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22 January 2020

language of work or name

1 reference

1 January 2011

1 reference

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22 January 2020

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22 January 2020

volume

148

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22 January 2020

page(s)

385-407; discussion 421-41

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21322495%20AND%20SRC:MED&resulttype=core&format=json

A survey of active site access channels in cytochromes P450.

22 January 2020

cites work

1 reference

Redesigning dehalogenase access tunnels as a strategy for degrading an anthropogenic substrate

21 January 2018

1 reference

Tunneling of intermediates in enzyme-catalyzed reactions

21 January 2018

1 reference

Enzymes with molecular tunnels

21 January 2018

1 reference

Tryptophan synthase: the workings of a channeling nanomachine

21 January 2018

1 reference

A combined theoretical and experimental study of the ammonia tunnel in carbamoyl phosphate synthetase

21 January 2018

1 reference

Carbamoyl-phosphate synthetase. Creation of an escape route for ammonia

21 January 2018

1 reference

Structure of carbamoyl phosphate synthetase: a journey of 96 A from substrate to product

21 January 2018

1 reference

Ligand pathways in myoglobin: a review of Trp cavity mutations

21 January 2018

1 reference

Mapping the pathways for O2 entry into and exit from myoglobin.

21 January 2018

1 reference

Imaging the migration pathways for O2, CO, NO, and Xe inside myoglobin

21 January 2018

1 reference

Ligand diffusion in globins: simulations versus experiment

21 January 2018

1 reference

Atomic level computational identification of ligand migration pathways between solvent and binding site in myoglobin

21 January 2018

1 reference

Channeling of carbon monoxide during anaerobic carbon dioxide fixation

21 January 2018

1 reference

A Ni-Fe-Cu center in a bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase

21 January 2018

1 reference

Ni-Zn-[Fe4-S4] and Ni-Ni-[Fe4-S4] clusters in closed and open subunits of acetyl-CoA synthase/carbon monoxide dehydrogenase

21 January 2018

1 reference

Xenon in and at the end of the tunnel of bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase

21 January 2018

1 reference

Oxygen tolerance of the H2-sensing [NiFe] hydrogenase from Ralstonia eutropha H16 is based on limited access of oxygen to the active site.

21 January 2018

1 reference

Enlarging the gas access channel to the active site renders the regulatory hydrogenase HupUV of Rhodobacter capsulatus O2 sensitive without affecting its transductory activity.

21 January 2018

1 reference

Relating diffusion along the substrate tunnel and oxygen sensitivity in hydrogenase.

21 January 2018

1 reference

Steric control of oxygenation regiochemistry in soybean lipoxygenase-1.

21 January 2018

1 reference

Kinetic Studies of Oxygen Reactivity in Soybean Lipoxygenase-1

21 January 2018

1 reference

How do enzymes activate oxygen without inactivating themselves?

21 January 2018

1 reference

Identification of a gatekeeper residue that prevents dehydrogenases from acting as oxidases.

21 January 2018

1 reference

Multiple pathways guide oxygen diffusion into flavoenzyme active sites

21 January 2018

1 reference

CAVER: a new tool to explore routes from protein clefts, pockets and cavities

21 January 2018

1 reference

MolAxis: efficient and accurate identification of channels in macromolecules

21 January 2018

1 reference

CASTp: computed atlas of surface topography of proteins with structural and topographical mapping of functionally annotated residues

21 January 2018

1 reference

Gas access to the active site of Ni-Fe hydrogenases probed by X-ray crystallography and molecular dynamics.

21 January 2018

1 reference

Analysis of xenon binding to photosystem II by X-ray crystallography.

21 January 2018

1 reference

Probing the accessibility of the Mn(4)Ca cluster in photosystem II: channels calculation, noble gas derivatization, and cocrystallization with DMSO.

21 January 2018

1 reference

Using xenon as a probe for dioxygen-binding sites in copper amine oxidases.

21 January 2018

1 reference

Exploring Molecular Oxygen Pathways in Hansenula polymorpha Copper-containing Amine Oxidase

21 January 2018

1 reference

The oxygen-binding vs. oxygen-consuming paradigm in biocatalysis: structural biology and biomolecular simulation

21 January 2018

1 reference

Pathways of H2 toward the active site of [NiFe]-hydrogenase

21 January 2018

1 reference

Experimental approaches to kinetics of gas diffusion in hydrogenase

21 January 2018

1 reference

The X-ray crystal structures of wild-type and EQ(I-286) mutant cytochrome c oxidases from Rhodobacter sphaeroides

21 January 2018

1 reference

A single-amino-acid lid renders a gas-tight compartment within a membrane-bound transporter

21 January 2018

1 reference

Crystallographic studies of Xe and Kr binding within the large internal cavity of cytochrome ba3 from Thermus thermophilus: structural analysis and role of oxygen transport channels in the heme-Cu oxidases

21 January 2018

1 reference

Desulfovibrio desulfuricans iron hydrogenase: the structure shows unusual coordination to an active site Fe binuclear center

21 January 2018

1 reference

Finding gas diffusion pathways in proteins: application to O2 and H2 transport in CpI [FeFe]-hydrogenase and the role of packing defects

21 January 2018

1 reference

Molecular dynamics and experimental investigation of H(2) and O(2) diffusion in [Fe]-hydrogenase.

21 January 2018

1 reference

The tunnel of acetyl-coenzyme a synthase/carbon monoxide dehydrogenase regulates delivery of CO to the active site

21 January 2018

1 reference

Function of the tunnel in acetylcoenzyme A synthase/carbon monoxide dehydrogenase

21 January 2018

1 reference

Restricted passage of reaction intermediates through the ammonia tunnel of carbamoyl phosphate synthetase

21 January 2018

1 reference

Carbamate transport in carbamoyl phosphate synthetase: a theoretical and experimental investigation

21 January 2018

1 reference

Kinetic characterization of channel impaired mutants of tryptophan synthase.

21 January 2018

1 reference

Ligand binding in a docking site of cytochrome C oxidase: a time-resolved step-scan Fourier transform infrared study.

21 January 2018

1 reference

Enzyme electrokinetics: using protein film voltammetry to investigate redox enzymes and their mechanisms

21 January 2018

1 reference

Investigating and exploiting the electrocatalytic properties of hydrogenases

21 January 2018

1 reference

Direct electrochemistry of redox enzymes as a tool for mechanistic studies

21 January 2018

1 reference

Trapping an intermediate of dinitrogen (N2) reduction on nitrogenase

21 January 2018

1 reference

Molecular dioxygen enters the active site of 12/15-lipoxygenase via dynamic oxygen access channels

21 January 2018

1 reference

The Binding and Release of Oxygen and Hydrogen Peroxide Are Directed by a Hydrophobic Tunnel in Cholesterol Oxidase †

21 January 2018

1 reference

Relationship between the size of the bottleneck 15 A from iron in the main channel and the reactivity of catalase corresponding to the molecular size of substrates

21 January 2018

1 reference

Pathways and mechanisms for product release in the engineered haloalkane dehalogenases explored using classical and random acceleration molecular dynamics simulations.

21 January 2018

1 reference

An electrical potential in the access channel of catalases enhances catalysis

21 January 2018

1 reference

Substrate flow in catalases deduced from the crystal structures of active site variants of HPII from Escherichia coli

21 January 2018

1 reference

Introduction of methionines in the gas channel makes [NiFe] hydrogenase aero-tolerant

21 January 2018

1 reference

Distal pocket polarity in ligand binding to myoglobin: structural and functional characterization of a threonine68(E11) mutant

21 January 2018

1 reference

Structural dynamics of myoglobin: ligand migration and binding in valine 68 mutants

21 January 2018

1 reference

Structure/Function Relationships of [NiFe]- and [FeFe]-Hydrogenases

21 January 2018

1 reference

(14)N HYSCORE investigation of the H-cluster of [FeFe] hydrogenase: evidence for a nitrogen in the dithiol bridge.

21 January 2018

1 reference

Spectroelectrochemical characterization of the active site of the [FeFe] hydrogenase HydA1 from Chlamydomonas reinhardtii.

21 January 2018

1 reference

X-ray crystal structure of the Fe-only hydrogenase (CpI) from Clostridium pasteurianum to 1.8 angstrom resolution

21 January 2018

1 reference

Dithiomethylether as a ligand in the hydrogenase h-cluster

21 January 2018

1 reference

The hyperthermophilic bacterium, Thermotoga maritima, contains an unusually complex iron-hydrogenase: amino acid sequence analyses versus biochemical characterization.

21 January 2018

1 reference

Solution structure of HndAc: a thioredoxin-like domain involved in the NADP-reducing hydrogenase complex

21 January 2018

1 reference

Homologous and heterologous overexpression in Clostridium acetobutylicum and characterization of purified clostridial and algal Fe-only hydrogenases with high specific activities

21 January 2018

1 reference

Electrochemical kinetic investigations of the reactions of [FeFe]-hydrogenases with carbon monoxide and oxygen: comparing the importance of gas tunnels and active-site electronic/redox effects

21 January 2018

1 reference

The active site of the [FeFe]-hydrogenase from Desulfovibrio desulfuricans. II. Redox properties, light sensitivity and CO-ligand exchange as observed by infrared spectroscopy.

21 January 2018

1 reference

Electrochemical investigations of the interconversions between catalytic and inhibited states of the [FeFe]-hydrogenase from Desulfovibrio desulfuricans.

21 January 2018

1 reference

Electrochemical definitions of O2 sensitivity and oxidative inactivation in hydrogenases.

21 January 2018

1 reference

Enzyme electrokinetics: electrochemical studies of the anaerobic interconversions between active and inactive states of Allochromatium vinosum [NiFe]-hydrogenase.

21 January 2018

1 reference

"Two-step" chronoamperometric method for studying the anaerobic inactivation of an oxygen tolerant NiFe hydrogenase

21 January 2018

1 reference

Hydrogen-activating enzymes: activity does not correlate with oxygen sensitivity

21 January 2018

1 reference

Microalgae: a green source of renewable H(2).

21 January 2018

1 reference

Photobiological hydrogen-producing systems

21 January 2018

1 reference

How oxygen attacks [FeFe] hydrogenases from photosynthetic organisms

21 January 2018

1 reference

Inactivation of [Fe-Fe]-Hydrogenase by O(2). Thermodynamics and Frontier Molecular Orbitals Analyses

21 January 2018

1 reference

Oxygen Pressurized X-Ray Crystallography: Probing the Dioxygen Binding Site in Cofactorless Urate Oxidase and Implications for Its Catalytic Mechanism

21 January 2018

1 reference

Sub-atomic resolution crystal structure of cholesterol oxidase: what atomic resolution crystallography reveals about enzyme mechanism and the role of the FAD cofactor in redox activity

21 January 2018

1 reference

Oxygen access to the active site of cholesterol oxidase through a narrow channel is gated by an Arg-Glu pair

21 January 2018

1 reference

Ligand diffusion in the catalase from Proteus mirabilis: a molecular dynamics study

21 January 2018

1 reference

Hydrogen production in nitrogenase mutants in Anabaena variabilis

21 January 2018

1 reference

Theoretical Study of Dioxygen Induced Inhibition of [FeFe]-Hydrogenase

21 January 2018

1 reference

Heme Proteins: The Role of Solvent in the Dynamics of Gates and Portals

21 January 2018

1 reference

21 January 2018

Identifiers

DOI

10.1039/C004099C

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21322495%20AND%20SRC:MED&resulttype=core&format=json

release_yhjctsj6gvcgnmcasfvvl4yttm

22 January 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/yhjctsj6gvcgnmcasfvvl4yttm

mapped directly with Wikidata item

24 November 2022

based on heuristic

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